ArticleFrontiers in plant science2016
Genome-Wide Association Mapping in the Global Diversity Set Reveals New QTL Controlling Root System and Related Shoot Variation in Barley.
Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed.
- Genetic dissection of root traits in barley identifies major QTLs and domestication signature.Plant cell reports · 2026Article
- Marker-trait association analysis for root and shoot traits at the seedling stage of wild barley (AoB PLANTS · 2025Article
- Genetic control of root/shoot biomass partitioning in barley seedlings.Frontiers in plant science · 2024Article
- Characterization of the Moroccan Barley Germplasm Preserved in the Polish Genebank as a First Step towards Selecting Forms with Increased Drought Tolerance.International journal of molecular sciences · 2023Article
- Dissecting the genetic architecture of root-related traits in a grafted wild Vitis berlandieri population for grapevine rootstock breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Genome-wide association study of agronomical and root-related traits in spring barley collection grown under field conditions.Frontiers in plant science · 2023Article
- Genetic characterization of root architectural traits in barley (Frontiers in plant science · 2023Article
- Transcriptomic and co-expression network analyses on diverse wheat landraces identifies candidate master regulators of the response to early drought.Frontiers in plant science · 2023Article
- Pinpointing genomic loci for drought-induced proline and hydrogen peroxide accumulation in bread wheat under field conditions.BMC plant biology · 2022Article
- QTLs Controlling Physiological and Morphological Traits of Barley (Hordeum vulgare L.) Seedlings under Salinity, Drought, and Normal ConditionsBiotech (Basel (Switzerland)) · 2022Article
- Genetic Dissection of Seedling Root System Architectural Traits in a Diverse Panel of Hexaploid Wheat through Multi-Locus Genome-Wide Association Mapping for Improving Drought Tolerance.International journal of molecular sciences · 2021Article
- Importance of Landraces in Cereal Breeding for Stress Tolerance.Plants (Basel, Switzerland) · 2021Review
- Genetics and genomics of root system variation in adaptation to drought stress in cereal crops.Journal of experimental botany · 2021Review
- Detailed Genetic Analysis for Identifying QTLs Associated with Drought Tolerance at Seed Germination and Seedling Stages in Barley.Plants (Basel, Switzerland) · 2020Article
- Physiological and morphological responses of different spring barley genotypes to water deficit and associated QTLs.PloS one · 2020Article
- Drought Stress Tolerance in Wheat and Barley: Advances in Physiology, Breeding and Genetics Research.International journal of molecular sciences · 2019Review
- Marker-trait association for grain weight of spring barley in well-watered and drought environments.Molecular biology reports · 2019Article
- Genome-wide association mapping in a diverse spring barley collection reveals the presence of QTL hotspots and candidate genes for root and shoot architecture traits at seedling stage.BMC plant biology · 2019Article
- The Complex Genetic Architecture of Early Root and Shoot Traits in Flax Revealed by Genome-Wide Association Analyses.Frontiers in plant science · 2019Article
- Genetic Dissection of Root System Architectural Traits in Spring Barley.Frontiers in plant science · 2019Article
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Abstract
The fibrous root system is a visible sign of ecological adaptation among barley natural populations. In the present study, we utilized rich barley diversity to dissect the genetic basis of root system variation and its link with shoot attributes under well-water and drought conditions. Genome-wide association mapping of phenotype data using a dense genetic map (5892 SNP markers) revealed 17 putative QTL for root and shoot traits. Among these, at 14 loci the preeminence of exotic QTL alleles resulted in trait improvements. The most promising QTL were quantified using haplotype analysis at local and global genome levels. The strongest QTL was found on chromosome 1H which accounted for root dry weight and tiller number simultaneously. Candidate gene analysis across the targeted region detected a crucial amino acid substitution mutation in the conserved domain of a WRKY29 transcription factor among genotypes bearing major and minor QTL alleles. Similarly, the drought inducible QTL QRdw.5H (5H, 95.0 cM) seems to underlie 37 amino acid deletion and substitution mutations in the conserved domain of two related genes CBF10B and CBF10A, respectively. The identification and further characterization of these candidate genes will be essential to decipher genetics behind developmental and natural adaptation mechanisms of barley.
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