ArticleFrontiers in plant science2016
Application of the Ribosomal DNA ITS2 Region of Physalis (Solanaceae): DNA Barcoding and Phylogenetic Study.
Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
24 citing papers in PubMed, 71 citations in OpenAlex.
- Comparative Biology Research on the Reproductive Organs BetweenPlants (Basel, Switzerland) · 2026Article
- From Phenotypes to Genotypes: Enhancing the Identification ofPlants (Basel, Switzerland) · 2025Article
- Chloroplast genomic insights into adaptive evolution and rapid radiation in the genus Passiflora (Passifloraceae).BMC plant biology · 2025Article
- Molecular identification, genetic diversity, and secondary structure predictions of Physalis species using ITS2 DNA barcoding.BMC plant biology · 2024Article
- Molecular identification and studies on genetic diversity and structure-related GC heterogeneity of Spatholobus Suberectus based on ITS2.Scientific reports · 2024Article
- Advances inFrontiers in plant science · 2024Review
- Development of Chloroplast Microsatellite Markers and Evaluation of Genetic Diversity and Population Structure of Cutleaf Groundcherry (Plants (Basel, Switzerland) · 2023Article
- Article
- Complete Plastome ofGenes · 2022Article
- Molecular and metabolic traits of some Egyptian species of Cassia L. and Senna Mill (Fabaceae-Caesalpinioideae).BMC plant biology · 2022Article
- Assessment of ITS2 Region Relevance for Taxa Discrimination and Phylogenetic Inference among Pinaceae.Plants (Basel, Switzerland) · 2022Article
- Development and Application of a Cultivar-Specific Sequence-Characterized Amplified Region (SCAR) Marker for the Detection ofPlants (Basel, Switzerland) · 2022Article
- Challenges in Medicinal and Aromatic Plants DNA Barcoding-Lessons from the Lamiaceae.Plants (Basel, Switzerland) · 2022Review
- Molecular Characterization of Wild and Cultivated Strawberry (Genetics research · 2022Article
- Genetic diversity and biological activity ofSaudi journal of biological sciences · 2021Article
- DNA barcoding of native Caucasus herbal plants: potentials and limitations in complex groups and implications for phylogeographic patterns.Biodiversity data journal · 2021Article
- Molecular identification and evolutionary relationships between the subspecies of Musa by DNA barcodes.BMC genomics · 2020Article
- Efficacy of DNA barcode internal transcribed spacer 2 (ITS 2) in phylogenetic study ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2020Article
- Complete chloroplast genomes of four Physalis species (Solanaceae): lights into genome structure, comparative analysis, and phylogenetic relationships.BMC plant biology · 2020Article
- Carotenogenesis and chromoplast development during ripening of yellow, orange and red colored Physalis fruit.Planta · 2020Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
8 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Recently, commercial interest in Physalis species has grown worldwide due to their high nutritional value, edible fruit, and potential medicinal properties. However, many Physalis species have similar shapes and are easily confused, and consequently the phylogenetic relationships between Physalis species are poorly understood. This hinders their safe utilization and genetic resource conservation. In this study, the nuclear ribosomal ITS2 region was used to identify species and phylogenetically examine Physalis. Eighty-six ITS2 regions from 45 Physalis species were analyzed. The ITS2 sequences were aligned using Clustal W and genetic distances were calculated using MEGA V6.0. The results showed that ITS2 regions have significant intra- and inter-specific divergences, obvious barcoding gaps, and higher species discrimination rates (82.2% for both the BLASTA1 and nearest distance methods). In addition, the secondary structure of ITS2 provided another way to differentiate species. Cluster analysis based on ITS2 regions largely concurred with the relationships among Physalis species established by many previous molecular analyses, and showed that most sections of Physalis appear to be polyphyletic. Our results demonstrated that ITS2 can be used as an efficient and powerful marker in the identification and phylogenetic study of Physalis species. The technique provides a scientific basis for the conservation of Physalis plants and for utilization of resources.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.