Evidence map›Paper›PMID 27486449›Full record

ArticleFrontiers in microbiology2016

Complete Sequence of pEC012, a Multidrug-Resistant IncI1 ST71 Plasmid Carrying bla CTX-M-65, rmtB, fosA3, floR, and oqxAB in an Avian Escherichia coli ST117 Strain.

Yu-Shan Pan, Zhi-Yong Zong, Li Yuan, Xiang-Dang Du, Hui Huang, Xing-Hao Zhong, Gong-Zheng Hu

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Molecular Analysis ofMicroorganisms · 2024
    Article
  2. Review
  3. The nature and epidemiology of OqxAB, a multidrug efflux pump.Antimicrobial resistance and infection control · 2019
    Review
  4. Article
  5. Spread of the florfenicol resistanceAntimicrobial resistance and infection control · 2018
    Article
  6. Frequent TnAntimicrobial agents and chemotherapy · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yu-Shan PanCollege of Animal Science and Veterinary Medicine, Henan Agricultural University Zhengzhou, China.
Zhi-Yong ZongWest China Hospital, Sichuan University Chengdu, China.
Li YuanCollege of Animal Science and Veterinary Medicine, Henan Agricultural University Zhengzhou, China.
Xiang-Dang DuCollege of Animal Science and Veterinary Medicine, Henan Agricultural University Zhengzhou, China.
Hui HuangCollege of Animal Science and Veterinary Medicine, Henan Agricultural University Zhengzhou, China.
Xing-Hao ZhongCollege of Animal Science and Veterinary Medicine, Henan Agricultural University Zhengzhou, China.
Gong-Zheng HuCollege of Animal Science and Veterinary Medicine, Henan Agricultural University Zhengzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A 139,622-bp IncI1 ST71 conjugative plasmid pEC012 from an avian Escherichia coli D-ST117 strain was sequenced, which carried five IS26-bracketed resistance modules: IS26-fosA3-orf1-orf2-Δorf3-IS26, IS26-fip-ΔISEcp1-bla CTX-M-65-IS903D-iroN-IS26, IS26-ΔtnpR-bla TEM-1-rmtB-IS26, IS26-oqxAB-IS26, and IS26-floR-aac(3)-IV-IS26. The backbone of pEC012 was similar to that of several other IncI1 ST71 plasmids: pV408, pM105, and pC271, but these plasmids had different arrangements of multidrug resistance region. In addition, the novel ISEc57 element was identified, which is in the IS21 family. The stepwise emergence of multi-resistance regions demonstrated the accumulation of different resistance determinants through homologous recombination. To the best of our knowledge, this is the first study to identify a multidrug-resistant IncI1 ST71 plasmid carrying bla CTX-M-65, rmtB, fosA3, floR, and oqxAB in an avian E. coli ST117 strain.

Indexed as

16S rRNA methylaseextended-spectrum β-lactamasesfosfomycinIS26-composite transposonTn2

Identifiers

PMID27486449
PMCPMC4947595

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.