Evidence map›Paper›PMID 27482924›Full record

ArticleThe ISME journal2017

Metal stressors consistently modulate bacterial conjugal plasmid uptake potential in a phylogenetically conserved manner.

Uli Klümper, Arnaud Dechesne, Leise Riber, Kristian K Brandt, Arda Gülay, Søren J Sørensen, Barth F Smets

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 157 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Uli KlümperDepartment of Environmental Engineering, Technical University of Denmark, Lyngby, Denmark.
Arnaud DechesneDepartment of Environmental Engineering, Technical University of Denmark, Lyngby, Denmark.ORCID 0000-0002-6638-2158
Leise RiberDepartment of Biology, University of Copenhagen, Copenhagen, Denmark.
Kristian K BrandtDepartment of Plant and Environmental Sciences, University of Copenhagen, Frederiksberg, Denmark.
Arda GülayDepartment of Environmental Engineering, Technical University of Denmark, Lyngby, Denmark.
Søren J SørensenDepartment of Biology, University of Copenhagen, Copenhagen, Denmark.
Barth F SmetsDepartment of Environmental Engineering, Technical University of Denmark, Lyngby, Denmark.
Technical University of Denmark · DKUniversity of Copenhagen · DK

Funding

Biotechnology and Biological Sciences Research CouncilMedical Research Council MR/N007174/1
6 · The paper itself

Abstract

The environmental stimulants and inhibitors of conjugal plasmid transfer in microbial communities are poorly understood. Specifically, it is not known whether exposure to stressors may cause a community to alter its plasmid uptake ability. We assessed whether metals (Cu, Cd, Ni, Zn) and one metalloid (As), at concentrations causing partial growth inhibition, modulate community permissiveness (that is, uptake ability) against a broad-host-range IncP-type plasmid (pKJK5). Cells were extracted from an agricultural soil as recipient community and a cultivation-minimal filter mating assay was conducted with an exogenous E. coli donor strain. The donor hosted a gfp-tagged pKJK5 derivative from which conjugation events could be microscopically quantified and transconjugants isolated and phylogenetically described at high resolution via FACS and 16S rRNA amplicon sequencing. Metal stress consistently decreased plasmid transfer frequencies to the community, while the transconjugal pool richness remained unaffected with OTUs belonging to 12 bacterial phyla. The taxonomic composition of the transconjugal pools was distinct from their respective recipient communities and clustered dependent on the stress type and dose. However, for certain OTUs, stress increased or decreased permissiveness by more than 1000-fold and this response was typically correlated across different metals and doses. The response to some stresses was, in addition, phylogenetically conserved. This is the first demonstration that community permissiveness is sensitive to metal(loid) stress in a manner that is both partially consistent across stressors and phylogenetically conserved.

Indexed as

Conjugation, GeneticPhylogenyBacteriaEscherichia coliGene Transfer, HorizontalMetalsPlasmidsRNA, Ribosomal, 16SSoil MicrobiologyMetalsRNA, Ribosomal, 16S

Identifiers

PMID27482924
PMCPMC5097465
OpenAlexW2478887792

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.