Evidence map›Paper›PMID 27482653›Full record

ArticleeLife2016

Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio.

Chase A Weidmann, Chen Qiu, René M Arvola, Tzu-Fang Lou, Jordan Killingsworth, Zachary T Campbell, Traci M Tanaka Hall, Aaron C Goldstrohm

Open access · goldAbstract read
In one paragraph

Article in eLife, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 86 citations in OpenAlex.

  1. Review
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  6. Review
  7. Reevaluation of whether histones are asymmetrically segregated during asymmetric divisions of stem cells inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Review
  9. Article
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  11. Article
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  14. Regulation of theRNA (New York, N.Y.) · 2024
    Article
  15. A higher order PUF complex is central to regulation ofbioRxiv : the preprint server for biology · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Chase A WeidmannDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.
Chen QiuEpigenetics and Stem Cell Biology Laboratory, National Institutes of Health, Research Triangle Park, United States.
René M ArvolaDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.
Tzu-Fang LouDepartment of Biological Sciences, University of Texas at Dallas, Richardson, United States.
Jordan KillingsworthDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.
Zachary T CampbellDepartment of Biological Sciences, University of Texas at Dallas, Richardson, United States.
Traci M Tanaka HallEpigenetics and Stem Cell Biology Laboratory, National Institutes of Health, Research Triangle Park, United States.
Aaron C GoldstrohmDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.ORCID 0000-0002-1867-8763
University of Michigan · USNational Institutes of Health · USThe University of Texas at Dallas · USUniversity of Minnesota · US

Funding

Structural Studies Of Post-Transcriptional Gene RegulationZIAES050165 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI HALL, TRACI M · 2009 to 2025
$45.7M
PREDOCTORAL TRAINING IN GENETICST32GM007544 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MORAN, JOHN V. · 1985 to 2022
$11.3M
Request to Transfer R01GM105707-03 Novel regulatory mechanisms of Drosophila Pumilio and NanosR01GM105707 · NIGMS · UNIVERSITY OF MINNESOTA · PI GOLDSTROHM, AARON CHARLES · 2013 to 2022
$2.7M
NIGMS NIH HHS R01 GM105707NIGMS NIH HHS T32 GM007544
6 · The paper itself

Abstract

Collaboration among the multitude of RNA-binding proteins (RBPs) is ubiquitous, yet our understanding of these key regulatory complexes has been limited to single RBPs. We investigated combinatorial translational regulation by Drosophila Pumilio (Pum) and Nanos (Nos), which control development, fertility, and neuronal functions. Our results show how the specificity of one RBP (Pum) is modulated by cooperative RNA recognition with a second RBP (Nos) to synergistically repress mRNAs. Crystal structures of Nos-Pum-RNA complexes reveal that Nos embraces Pum and RNA, contributes sequence-specific contacts, and increases Pum RNA-binding affinity. Nos shifts the recognition sequence and promotes repression complex formation on mRNAs that are not stably bound by Pum alone, explaining the preponderance of sub-optimal Pum sites regulated in vivo. Our results illuminate the molecular mechanism of a regulatory switch controlling crucial gene expression programs, and provide a framework for understanding how the partnering of RBPs evokes changes in binding specificity that underlie regulatory network dynamics.

Indexed as

Gene Expression RegulationAnimalsCrystallography, X-RayDrosophilaDrosophila ProteinsModels, MolecularProtein BindingProtein ConformationRepressor ProteinsRNARNA-Binding ProteinsDrosophila Proteinsnos protein, Drosophilapum protein, DrosophilaRepressor ProteinsRNARNA-Binding Proteinsbiophysicscooperative RNA-bindingdevelopmental biologyD. melanogasterNanosPumiliostem cellsstructural biologytranslational repression

Identifiers

PMID27482653
PMCPMC4995099
OpenAlexW2476195310

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.