Evidence map›Paper›PMID 27481535›Full record

ArticleScientific reports2016

Specific detection of interferon regulatory factor 5 (IRF5): A case of antibody inequality.

Dan Li, Saurav De, Dan Li, Su Song, Bharati Matta, Betsy J Barnes

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Dan LiCenter for Autoimmune and Musculoskeletal Diseases, Feinstein Institute for Medical Research, North well Health, Manhasset, NY 11030, United States.
Saurav DeCenter for Autoimmune and Musculoskeletal Diseases, Feinstein Institute for Medical Research, North well Health, Manhasset, NY 11030, United States.
Dan LiCenter for Autoimmune and Musculoskeletal Diseases, Feinstein Institute for Medical Research, North well Health, Manhasset, NY 11030, United States.
Su SongCenter for Autoimmune and Musculoskeletal Diseases, Feinstein Institute for Medical Research, North well Health, Manhasset, NY 11030, United States.
Bharati MattaCenter for Autoimmune and Musculoskeletal Diseases, Feinstein Institute for Medical Research, North well Health, Manhasset, NY 11030, United States.
Betsy J BarnesCenter for Autoimmune and Musculoskeletal Diseases, Feinstein Institute for Medical Research, North well Health, Manhasset, NY 11030, United States.
Northwell Health · USFeinstein Institute for Medical Research · USRutgers, The State University of New Jersey · US

Funding

Determining the function of IRF5 tumor suppressor in HCV pathogenesisR21CA191903 · NCI · FEINSTEIN INSTITUTE FOR MEDICAL RESEARCH · PI BARNES, BETSY J · 2015 to 2016
$403k
Identification of a new factor, interferon regulatory factor 5, that controls spontaneous mammary tumorigenesisR21CA195256 · NCI · FEINSTEIN INSTITUTE FOR MEDICAL RESEARCH · PI BARNES, BETSY J · 2015 to 2016
$391k
IRF5-TNPO3 locus: Inclusion of TNPO3 as a unique regulator of IRF5 expression anR21AR065959 · NIAMS · RBHS-NEW JERSEY MEDICAL SCHOOL · PI BARNES, BETSY J · 2014 to 2015
$385k
NCI NIH HHS R21 CA191903NCI NIH HHS R21 CA195256NIAMS NIH HHS R21 AR065959
6 · The paper itself

Abstract

Interferon regulatory factor 5 (IRF5) is a member of the IRF family of transcription factors. IRF5 was first identified and characterized as a transcriptional regulator of type I interferon expression after virus infection. In addition to its critical role(s) in the regulation and development of host immunity, subsequent studies revealed important roles for IRF5 in autoimmunity, cancer, obesity, pain, cardiovascular disease, and metabolism. Based on these important disease-related findings, a large number of commercial antibodies have become available to study the expression and function of IRF5. Here we validate a number of these antibodies for the detection of IRF5 by immunoblot, flow cytometry, and immunofluorescence or immunohistochemistry using well-established positive and negative controls. Somewhat surprising, the majority of commercial antibodies tested were unable to specifically recognize human or mouse IRF5. We present data on antibodies that do specifically recognize human or mouse IRF5 in a particular application. These findings reiterate the importance of proper controls and molecular weight standards for the analysis of protein expression. Given that dysregulated IRF5 expression has been implicated in the pathogenesis of numerous diseases, including autoimmune and cancer, results indicate that caution should be used in the evaluation and interpretation of IRF5 expression analysis.

Indexed as

Antibody SpecificityAnimalsAntibodiesB-LymphocytesCells, CulturedInterferon Regulatory FactorsMacrophagesMiceMice, Inbred C57BLMice, KnockoutMonocytesT-LymphocytesAntibodiesInterferon Regulatory FactorsIrf5 protein, mouse

Identifiers

PMID27481535
PMCPMC4969615
OpenAlexW2484798973

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.