Evidence map›Paper›PMID 27480506›Full record

ArticleAmerican journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics2016

A targeted sequencing study of glutamatergic candidate genes in suicide attempters with bipolar disorder.

Sophia C Gaynor, Marie E Breen, Eric T Monson, Kelly de Klerk, Meredith Parsons, Adam P DeLuca, Todd E Scheetz, Peter P Zandi, James B Potash, Virginia L Willour

Abstract read
In one paragraph

Article in American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Genetics of suicide ideation. A role for inflammation and neuroplasticity?European archives of psychiatry and clinical neuroscience · 2024
    Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Targeted sequencing of the LRRTM gene family in suicide attempters with bipolar disorder.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2020
    Article
  9. Article
  10. Article
  11. Investigating the Relationship Between DNA Methylation, Genetic Variation, and Suicide Attempt in Bipolar Disorder.Archives of suicide research : official journal of the International Academy for Suicide Research
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Sophia C GaynorDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa.
Marie E BreenDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa.
Eric T MonsonDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa.
Kelly de KlerkDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa.
Meredith ParsonsDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa.
Adam P DeLucaDepartment of Ophthalmology and Visual Sciences, University of Iowa Carver College of Medicine, Iowa City, Iowa.
Todd E ScheetzDepartment of Ophthalmology and Visual Sciences, University of Iowa Carver College of Medicine, Iowa City, Iowa.
Peter P ZandiDepartment of Mental Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
James B PotashDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa.
Virginia L WillourDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa.
University of Iowa · USJohns Hopkins University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007337 · NIGMS · UNIVERSITY OF IOWA · PI GEYER, PAMELA K., LENTZ, STEVEN R · 1985 to 2020
$15.9M
Genetic Risk Factor Suicidal BehaviorR01MH079240 · NIMH · UNIVERSITY OF IOWA · PI WILLOUR, VIRGINIA L · 2007 to 2015
$3.5M
Attempted Suicide Candidate Gene ResequencingR21MH092791 · NIMH · UNIVERSITY OF IOWA · PI WILLOUR, VIRGINIA L · 2011 to 2013
$401k
NIGMS NIH HHS T32 GM007337NIMH NIH HHS R01 MH079240NIMH NIH HHS R21 MH092791
6 · The paper itself

Abstract

Suicidal behavior has been shown to have a heritable component that is partly driven by psychiatric disorders [Brent and Mann, 2005]. However, there is also an independent factor contributing to the heritability of suicidal behavior. We previously conducted a genome-wide association study (GWAS) of bipolar suicide attempters and bipolar non-attempters to assess this independent factor [Willour et al., 2012]. This GWAS implicated glutamatergic neurotransmission in attempted suicide. In the current study, we have conducted a targeted next-generation sequencing study of the glutamatergic N-methyl-D-aspartate (NMDA) receptor, neurexin, and neuroligin gene families in 476 bipolar suicide attempters and 473 bipolar non-attempters. The goal of this study was to gather sequence information from coding and regulatory regions of these glutamatergic genes to identify variants associated with attempted suicide. We identified 186 coding variants and 4,298 regulatory variants predicted to be functional in these genes. No individual variants were overrepresented in cases or controls to a degree that was statistically significant after correction for multiple testing. Additionally, none of the gene-level results were statistically significant following correction. While this study provides no direct support for a role of the examined glutamatergic candidate genes, further sequencing in expanded gene sets and datasets will be required to ultimately determine whether genetic variation in glutamatergic signaling influences suicidal behavior. © 2016 Wiley Periodicals, Inc.

Indexed as

AdultAgedAged, 80 and overBipolar DisorderCalcium-Binding ProteinsCell Adhesion Molecules, NeuronalExcitatory Amino AcidsFemaleGenetic Predisposition to DiseaseGenetic VariationGenome-Wide Association StudyGlutamic AcidHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedCalcium-Binding ProteinsCell Adhesion Molecules, NeuronalExcitatory Amino AcidsGlutamic AcidNerve Tissue ProteinsNeural Cell Adhesion Moleculesneuroligin 1NRXN1 protein, humanReceptors, N-Methyl-D-Aspartatebipolar disordercandidate gene sequencingGRIN3ANLGN1suicidal behavior

Identifiers

PMID27480506
PMCPMC5814248
OpenAlexW2484887308

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.