Evidence map›Paper›PMID 27480107›Full record

ArticleThe Biochemical journal2016

Structural basis of arginine asymmetrical dimethylation by PRMT6.

Hong Wu, Weihong Zheng, Mohammad S Eram, Mynol Vhuiyan, Aiping Dong, Hong Zeng, Hao He, Peter Brown, Adam Frankel, Masoud Vedadi and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. The Emerging Role of PRMT6 in Cancer.Frontiers in oncology · 2022
    Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. PTEN arginine methylation by PRMT6 suppresses PI3K-AKT signaling and modulates pre-mRNA splicing.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Hong WuStructural Genomics Consortium, University of Toronto, Toronto, Ontario M5J 1L7, Canada.
Weihong ZhengChemical Biology Program, Memorial Sloan-Kettering Cancer Center, New York, N.Y 10065, U.S.A.
Mohammad S EramStructural Genomics Consortium, University of Toronto, Toronto, Ontario M5J 1L7, Canada.
Mynol VhuiyanFaculty of Pharmaceutical Sciences, The University of British Columbia, 2405 Wesbrook Mall, Vancouver, British Columbia V6T 1Z3, Canada.
Aiping DongStructural Genomics Consortium, University of Toronto, Toronto, Ontario M5J 1L7, Canada.
Hong ZengStructural Genomics Consortium, University of Toronto, Toronto, Ontario M5J 1L7, Canada.
Hao HeStructural Genomics Consortium, University of Toronto, Toronto, Ontario M5J 1L7, Canada.
Peter BrownStructural Genomics Consortium, University of Toronto, Toronto, Ontario M5J 1L7, Canada.
Adam FrankelFaculty of Pharmaceutical Sciences, The University of British Columbia, 2405 Wesbrook Mall, Vancouver, British Columbia V6T 1Z3, Canada.
Masoud VedadiStructural Genomics Consortium, University of Toronto, Toronto, Ontario M5J 1L7, Canada Department of Pharmacology and Toxicology, University of Toronto, 1 King's College Circle, Toronto, Ontario M5S 1A8, Canada.
Minkui LuoChemical Biology Program, Memorial Sloan-Kettering Cancer Center, New York, N.Y 10065, U.S.A.
Jinrong MinStructural Genomics Consortium, University of Toronto, Toronto, Ontario M5J 1L7, Canada Department of Physiology, University of Toronto, Toronto, Ontario M5S 1A8, Canada.
University of Toronto · CAMemorial Sloan Kettering Cancer Center · USUniversity of British Columbia · CACanada Research Chairs · CAStructural Genomics Consortium · CA

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Profile substrates and inhibitors of protein lysine methyltransferaseR01GM096056 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI LUO, MINKUI · 2011 to 2018
$3.2M
Interrogating Functions of Protein Methyltransferases with Chemical ToolsR01GM120570 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI LUO, MINKUI · 2016 to 2019
$1.8M
NCI NIH HHS P30 CA008748NIGMS NIH HHS R01 GM096056NIGMS NIH HHS R01 GM120570Wellcome Trust
6 · The paper itself

Abstract

PRMT6 is a type I protein arginine methyltransferase, generating the asymmetric dimethylarginine mark on proteins such as histone H3R2. Asymmetric dimethylation of histone H3R2 by PRMT6 acts as a repressive mark that antagonizes trimethylation of H3 lysine 4 by the MLL histone H3K4 methyltransferase. PRMT6 is overexpressed in several cancer types, including prostate, bladder and lung cancers; therefore, it is of great interest to develop potent and selective inhibitors for PRMT6. Here, we report the synthesis of a potent bisubstrate inhibitor GMS [6'-methyleneamine sinefungin, an analog of sinefungin (SNF)], and the crystal structures of human PRMT6 in complex, respectively, with S-adenosyl-L-homocysteine (SAH) and the bisubstrate inhibitor GMS that shed light on the significantly improved inhibition effect of GMS on methylation activity of PRMT6 compared with SAH and an S-adenosyl-L-methionine competitive methyltransferase inhibitor SNF. In addition, we also crystallized PRMT6 in complex with SAH and a short arginine-containing peptide. Based on the structural information here and available in the PDB database, we proposed a mechanism that can rationalize the distinctive arginine methylation product specificity of different types of arginine methyltransferases and pinpoint the structural determinant of such a specificity.

Indexed as

Amino Acid SequenceArginineCloning, MolecularCrystallography, X-RayHumansMethylationNuclear ProteinsProtein-Arginine N-MethyltransferasesProtein ConformationSequence Homology, Amino AcidArginineNuclear ProteinsPRMT6 protein, humanProtein-Arginine N-Methyltransferasesarginine methyltransferasebisubstrate inhibitorPRMT6

Identifiers

PMID27480107
PMCPMC5280038
OpenAlexW2495024662

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.