Evidence map›Paper›PMID 27479360›Full record

ArticlePloS one2016

Unique Clones of Vibrio cholerae O1 El Tor with Haitian Type ctxB Allele Implicated in the Recent Cholera Epidemics from Nigeria, Africa.

Akinsinde Kehinde Adewale, Gururaja Perumal Pazhani, Iwalokun Bamidele Abiodun, Oluwadun Afolabi, Olukoya Daniel Kolawole, Asish K Mukhopadhyay, Thanadarayan Ramamurthy

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

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  10. Novel Cholera Toxin Variant and ToxT Regulon in EnvironmentalApplied and environmental microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Akinsinde Kehinde AdewaleClinical Science Division, Nigerian Institute of Medical Research, Lagos, Nigeria.ORCID http://orcid.org/0000-0001-9500-006X
Gururaja Perumal PazhaniDivision of Molecular Microbiology, National Institute of Cholera and Enteric Diseases, Kolkata, India.
Iwalokun Bamidele AbiodunMolecular biology & Biotechnology Division, Nigerian Institute of Medical Research, Lagos, Nigeria.
Oluwadun AfolabiOlabisi Onabanjo University, Sagamu, Ogun, Nigeria.
Olukoya Daniel KolawoleDanifol foundation, Onipanu, Lagos, Nigeria.
Asish K MukhopadhyayDivision of Molecular Microbiology, National Institute of Cholera and Enteric Diseases, Kolkata, India.
Thanadarayan RamamurthyDivision of Molecular Microbiology, National Institute of Cholera and Enteric Diseases, Kolkata, India.
National Institute of Cholera and Enteric Diseases · INNigerian Institute of Medical Research · NGOlabisi Onabanjo University · NG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

objectivesThe antimicrobial susceptibility patterns and genetic characteristics of Vibrio cholerae O1, which is responsible for several cholera epidemics in Nigeria, are not reported in detail since 2007. In this study, we screened V. cholerae O1 El Tor biotype isolates from cholera cases and water samples from different states to investigate their phenotypic and genetic attributes with special reference to their clonality.

resultsAll the V. cholerae O1 biotype El Tor isolates isolated during 2007-2013 were susceptible to fluoroquinolones and tetracycline, the drugs currently used in the treatment of cholera cases in Nigeria. Emergence of CT genotype 7 (Haitian type of ctxB allele) was predominantly seen among Ogawa serotype and the CT genotype 1 (classical ctxB allele) was mostly found in Inaba serotype. Overall, V. cholerae O1 from clinical and water samples were found to be closely related as determined by the pulsed-field gel electrophoresis. V. cholerae isolates from Abia, Kano and Bauchi were found to be genetically distinct from the other states of Nigeria.

conclusionFecal contamination of the water sources may be the possible source of the cholera infection. Combined prevalence of Haitian and classical ctxB alleles were detected in Ogawa and Inaba serotypes, respectively. This study further demonstrated that V. cholerae O1 with the ctxB has been emerged similar to the isolates reported in Haiti. Our findings suggest that the use of fluoroquinolones or tetracycline/doxycycline may help in the effective management of acute cholera in the affected Nigerian states. In addition, strengthening the existing surveillance in the hospitals of all the states and supply of clean drinking water may control cholera outbreaks in the future.

Indexed as

AllelesAnti-Bacterial AgentsCholeraCholera ToxinCross-Sectional StudiesElectrophoresis, Gel, Pulsed-FieldFluoroquinolonesGenotypeHumansMicrobial Sensitivity TestsNigeriaPolymerase Chain ReactionSequence Analysis, DNASerogroupTetracyclineVibrio cholerae O1Anti-Bacterial AgentsCholera ToxinFluoroquinolonesTetracycline

Identifiers

PMID27479360
PMCPMC4968787
OpenAlexW2496246630

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.