Evidence map›Paper›PMID 27478708›Full record

ArticlePeerJ2016

Molecular characterization of an adiponectin receptor homolog in the white leg shrimp, Litopenaeus vannamei.

Ah Ran Kim, Md Jobaidul Alam, Tae-Ho Yoon, Soo Rin Lee, Hyun Park, Doo-Nam Kim, Doo-Hae An, Jae-Bong Lee, Chung Il Lee, Hyun-Woo Kim

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Effects of DietaryBiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Ah Ran KimInterdiciplinary Program of Biomedical Engineering, Pukyong National University , Busan , South Korea.
Md Jobaidul AlamDepartment of Marine Biology, Pukyong National University , Busan , South Korea.
Tae-Ho YoonInterdiciplinary Program of Biomedical Engineering, Pukyong National University , Busan , South Korea.
Soo Rin LeeInterdiciplinary Program of Biomedical Engineering, Pukyong National University , Busan , South Korea.
Hyun ParkKorea Polar Research Institute, Korea Ocean Research and Development Institute , Incheon , Republic of Korea.
Doo-Nam KimDistant-Water Fisheries Resources Research Division, National Institute of Fisheries Science , Busan , Republic of Korea.
Doo-Hae AnDistant-Water Fisheries Resources Research Division, National Institute of Fisheries Science , Busan , Republic of Korea.
Jae-Bong LeeDistant-Water Fisheries Resources Research Division, National Institute of Fisheries Science , Busan , Republic of Korea.
Chung Il LeeDepartment of Marine Bioscience, Gangneung-Wonju National University , Gangneung , Republic of Korea.
Hyun-Woo KimInterdiciplinary Program of Biomedical Engineering, Pukyong National University, Busan, South Korea; Department of Marine Biology, Pukyong National University, Busan, South Korea.
Pukyong National University · KRNational Fisheries Research and Development Institute · KRGangneung–Wonju National University · KRKorea Polar Research Institute · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adiponectin (AdipoQ) and its receptors (AdipoRs) are strongly related to growth and development of skeletal muscle, as well as glucose and lipid metabolism in vertebrates. Herein we report the identification of the first full-length cDNA encoding an AdipoR homolog (Liv-AdipoR) from the decapod crustacean Litopenaeus vannamei using a combination of next generation sequencing (NGS) technology and bioinformatics analysis. The full-length Liv-AdipoR (1,245 bp) encoded a protein that exhibited the canonical seven transmembrane domains (7TMs) and the inversed topology that characterize members of the progestin and adipoQ receptor (PAQR) family. Based on the obtained sequence information, only a single orthologous AdipoR gene appears to exist in arthropods, whereas two paralogs, AdipoR1 and AdipoR2, have evolved in vertebrates. Transcriptional analysis suggested that the single Liv-AdipoR gene appears to serve the functions of two mammalian AdipoRs. At 72 h after injection of 50 pmol Liv-AdipoR dsRNA (340 bp) into L. vannamei thoracic muscle and deep abdominal muscle, transcription levels of Liv-AdipoR decreased by 93% and 97%, respectively. This confirmed optimal conditions for RNAi of Liv-AdipoR. Knockdown of Liv-AdipoR resulted in significant changes in the plasma levels of ammonia, 3-methylhistine, and ornithine, but not plasma glucose, suggesting that that Liv-AdipoR is important for maintaining muscle fibers. The chronic effect of Liv-AdipoR dsRNA injection was increased mortality. Transcriptomic analysis showed that 804 contigs were upregulated and 212 contigs were downregulated by the knockdown of Liv-AdipoR in deep abdominal muscle. The significantly upregulated genes were categorized as four main functional groups: RNA-editing and transcriptional regulators, molecular chaperones, metabolic regulators, and channel proteins.

Indexed as

Adiponectin receptorDecapod crustaceanGPCRMetabolismRNAi

Identifiers

PMID27478708
PMCPMC4950565
OpenAlexW2463848726

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.