Evidence map›Paper›PMID 27477481›Full record

ArticleBiochimie

Alterations in ribosomal protein L19 that decrease the fidelity of translation.

John VanNice, Steven T Gregory, Divya Kamath, Michael O'Connor

Open access · greenAbstract read
In one paragraph

Article in Biochimie. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Frontiers in genetics · 2020
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

John VanNiceSchool of Biological Sciences, University of Missouri-Kansas City, Kansas City, MO, USA.
Steven T GregoryDepartment of Molecular Biology, Cell Biology & Biochemistry, Brown University, Providence, RI, 02912, USA; Department of Cell and Molecular Biology, University of Rhode Island, Kingston, RI, 02881, USA.
Divya KamathSchool of Biological Sciences, University of Missouri-Kansas City, Kansas City, MO, USA.
Michael O'ConnorSchool of Biological Sciences, University of Missouri-Kansas City, Kansas City, MO, USA. Electronic address: oconnormi@umkc.edu.
University of Missouri–Kansas City · USUniversity of Rhode Island · US

Funding

Structural Robustness of Ribosome Functional CentersR01GM094157 · NIGMS · BROWN UNIVERSITY · PI GREGORY, STEVEN, JOGL, GERWALD · 2010 to 2024
$4.4M
NIGMS NIH HHS R01 GM094157
6 · The paper itself

Abstract

Ribosomal protein L19 is an essential ribosomal protein and is a component of bridge B8, one of the protein-RNA bridges linking the large and small ribosomal subunits. Bridge B8 also contributes to the accuracy of translation by affecting GTPase activation by ribosome-bound aminoacyl tRNA-EF-Tu•GTP ternary complexes. Previous work has identified a limited number of accuracy-altering alterations in protein L19 of Salmonella enterica and Thermus thermophilus. Here, we have targeted the Escherichia coli rplS gene encoding L19 for mutagenesis and have screened for mutants with altered levels of miscoding. We have recovered 14 distinct L19 mutants, all of which promote increased stop codon readthrough, but do not have major effects on subunit association or cell growth. Examination of the E. coli 70S ribosome structure indicates that the amino acid substitutions cluster in three distinct regions of L19 and thereby potentially affect its interactions with L14 and 16S rRNA.

Indexed as

MutationBinding SitesEscherichia coliEscherichia coli ProteinsGuanosine TriphosphateModels, MolecularNucleic Acid ConformationPeptide Elongation Factor TuProtein BindingProtein BiosynthesisProtein DomainsRibosomal ProteinsRNA, Ribosomal, 16SRNA, Transfer, Amino AcylEscherichia coli ProteinsGuanosine TriphosphatePeptide Elongation Factor Turibosomal protein L19, E coliRibosomal ProteinsRNA, Ribosomal, 16SRNA, Transfer, Amino AcylMiscoding errorsRibosomal protein L19tRNA selection

Identifiers

PMID27477481
PMCPMC5859582
OpenAlexW2506810536

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.