Evidence map›Paper›PMID 27474798›Full record

ArticleeLife2016

mRNA poly(A)-tail changes specified by deadenylation broadly reshape translation in Drosophila oocytes and early embryos.

Stephen W Eichhorn, Alexander O Subtelny, Iva Kronja, Jamie C Kwasnieski, Terry L Orr-Weaver, David P Bartel

Open access · goldAbstract read
In one paragraph

Article in eLife, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
10.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 174 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Regulatory landscape of widespread stop codon readthrough inbioRxiv : the preprint server for biology · 2026
    Article
  5. RNA-binding is the essential biological function of thebioRxiv : the preprint server for biology · 2026
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Novel Genetic Variants inInternational journal of medical sciences · 2025
    Article
  17. Article
  18. Article
  19. Article
  20. Article

46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Stephen W EichhornHoward Hughes Medical Institute, Whitehead Institute for Biomedical Research, Cambridge, United States.ORCID 0000-0002-6410-4699
Alexander O SubtelnyHoward Hughes Medical Institute, Whitehead Institute for Biomedical Research, Cambridge, United States.
Iva KronjaDepartment of Biology, Massachusetts Institute of Technology, Cambridge, United States.
Jamie C KwasnieskiHoward Hughes Medical Institute, Whitehead Institute for Biomedical Research, Cambridge, United States.
Terry L Orr-WeaverDepartment of Biology, Massachusetts Institute of Technology, Cambridge, United States.
David P BartelHoward Hughes Medical Institute, Whitehead Institute for Biomedical Research, Cambridge, United States.ORCID 0000-0002-3872-2856
Howard Hughes Medical Institute · USWhitehead Institute for Biomedical Research · US

Funding

VIRUS PRODUCTION COREP30CA014051 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Angela Nicole Koehler · 1985 to 2026
$93.9M
Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Post-transcriptional gene regulationR35GM118135 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI DAVID P BARTEL · 2016 to 2026
$10.7M
MicroRNA genes and their functionsR01GM067031 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI BARTEL, DAVID P · 2002 to 2015
$7.3M
REPLICATION AND POLYTENIZATION IN DROSOPHILA DEVELOPMENTR01GM039341 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI ORR-WEAVER, TERRY L. · 1993 to 2013
$4.7M
Producing, provisioning, and protecting the egg: Regulation of DNA replication, mRNA translation, and proteolysis for the transition from oocyte to embryoR35GM118098 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI ORR-WEAVER, TERRY L. · 2016 to 2018
$2.0M
Post-transcriptional gene regulation during early Drosophila developmentF32GM120984 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI KWASNIESKI, JAMIE · 2016 to 2017
$115k
NCI NIH HHS P30 CA014051NIGMS NIH HHS F32 GM120984NIGMS NIH HHS R01 GM039341NIGMS NIH HHS R01 GM067031NIGMS NIH HHS R35 GM118098NIGMS NIH HHS R35 GM118135NIGMS NIH HHS T32 GM007753
6 · The paper itself

Abstract

Because maturing oocytes and early embryos lack appreciable transcription, posttranscriptional regulatory processes control their development. To better understand this control, we profiled translational efficiencies and poly(A)-tail lengths throughout Drosophila oocyte maturation and early embryonic development. The correspondence between translational-efficiency changes and tail-length changes indicated that tail-length changes broadly regulate translation until gastrulation, when this coupling disappears. During egg activation, relative changes in poly(A)-tail length, and thus translational efficiency, were largely retained in the absence of cytoplasmic polyadenylation, which indicated that selective poly(A)-tail shortening primarily specifies these changes. Many translational changes depended on PAN GU and Smaug, and these changes were largely attributable to tail-length changes. Our results also revealed the presence of tail-length-independent mechanisms that maintained translation despite tail-length shortening during oocyte maturation, and prevented essentially all translation of bicoid and several other mRNAs before egg activation. In addition to these fundamental insights, our results provide valuable resources for future studies.

Indexed as

Protein BiosynthesisAnimalsDrosophilaGene Expression RegulationOocytesRNA, MessengerRNA, Messengerchromosomesdevelopmental biologyD. melanogasterDrosophila embryogenesisDrosophila oogenesisgenesPAL-seqposttranscriptional gene regulationribosome footprint profilingstem cellswispy

Identifiers

PMID27474798
PMCPMC4988829
OpenAlexW2493043445

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.