Evidence map›Paper›PMID 27473689›Full record

ArticleBiology direct2016

Alpha proteobacterial ancestry of the [Fe-Fe]-hydrogenases in anaerobic eukaryotes.

Mauro Degli Esposti, Diego Cortez, Luis Lozano, Simon Rasmussen, Henrik Bjørn Nielsen, Esperanza Martinez Romero

Open access · goldAbstract read
In one paragraph

Article in Biology direct, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

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  2. Light-induced HProceedings of the National Academy of Sciences of the United States of America · 2024
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  13. The Physiology of Phagocytosis in the Context of Mitochondrial Origin.Microbiology and molecular biology reviews : MMBR · 2017
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Mauro Degli EspostiItalian Institute of Technology, Via Morego 30, 16136, Genoa, Italy. mauro.degliesposti@iit.it.
Diego CortezCenter for Genomic Sciences, UNAM Cuernavaca, Cuernavaca, Mexico.
Luis LozanoCenter for Genomic Sciences, UNAM Cuernavaca, Cuernavaca, Mexico.
Simon RasmussenDepartment of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Kemitorvet, Building 208, 2800, Kongens Lyngby, Denmark.
Henrik Bjørn NielsenDepartment of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Kemitorvet, Building 208, 2800, Kongens Lyngby, Denmark.
Esperanza Martinez RomeroCenter for Genomic Sciences, UNAM Cuernavaca, Cuernavaca, Mexico.
Universidad Del Valle De Cuernavaca · MXTechnical University of Denmark · DKItalian Institute of Technology · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledEukaryogenesis, a major transition in evolution of life, originated from the symbiogenic fusion of an archaea with a metabolically versatile bacterium. By general consensus, the latter organism belonged to α proteobacteria, subsequently evolving into the mitochondrial organelle of our cells. The consensus is based upon genetic and metabolic similarities between mitochondria and aerobic α proteobacteria but fails to explain the origin of several enzymes found in the mitochondria-derived organelles of anaerobic eukaryotes such as Trichomonas and Entamoeba. These enzymes are thought to derive from bacterial lineages other than α proteobacteria, e.g., Clostridium - an obligate anaerobe. [FeFe]-hydrogenase constitues the characteristic enzyme of this anaerobic metabolism and is present in different types also in Entamoeba and other anaerobic eukaryotes. Here we show that α proteobacteria derived from metagenomic studies possess both the cytosolic and organellar type of [FeFe]-hydrogenase, as well as all the proteins required for hydrogenase maturation. These organisms are related to cultivated members of the Rhodospirillales order previously suggested to be close relatives of mitochondrial ancestors. For the first time, our evidence supports an α proteobacterial ancestry for both the anaerobic and the aerobic metabolism of eukaryotes. REVIEWERS: This article was reviewed by William Martin and Nick Lane, both suggested by the Authors.

Indexed as

AlphaproteobacteriaAmino Acid SequenceBacterial ProteinsEvolution, MolecularGastrointestinal MicrobiomeHumansHydrogenasePhylogenyRhodospirillaceaeBacterial ProteinsHydrogenaseAnaerobic metabolismBioenergeticsEukaryogenesis[FeFe]-hydrogenaseMitochondria

Identifiers

PMID27473689
PMCPMC4967309
OpenAlexW2485936080

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.