Evidence map›Paper›PMID 27472900›Full record

ArticleeLife2016

Trisomy 21 consistently activates the interferon response.

Kelly D Sullivan, Hannah C Lewis, Amanda A Hill, Ahwan Pandey, Leisa P Jackson, Joseph M Cabral, Keith P Smith, L Alexander Liggett, Eliana B Gomez, Matthew D Galbraith and 2 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 241 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
241citing papers in PubMed, 2 pooled it
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

241 citing papers in PubMed, 2 syntheses or guidelines pooled it, 367 citations in OpenAlex.

  1. Pooled it
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  17. An AI-Powered Trisomy 21 Research Assistant.bioRxiv : the preprint server for biology · 2026
    Article
  18. Article
  19. Article
  20. Article

181 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Kelly D SullivanLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Aurora, United States.
Hannah C LewisLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Aurora, United States.
Amanda A HillLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Aurora, United States.
Ahwan PandeyLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Aurora, United States.
Leisa P JacksonLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Aurora, United States.
Joseph M CabralLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Aurora, United States.
Keith P SmithLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Aurora, United States.
L Alexander LiggettLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Aurora, United States.
Eliana B GomezLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Aurora, United States.
Matthew D GalbraithLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Aurora, United States.
James DeGregoriLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Aurora, United States.
Joaquín M EspinosaLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Aurora, United States.ORCID 0000-0001-9048-1941
Howard Hughes Medical Institute · USUniversity of Colorado Denver · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Colorado Clinical and Translational Sciences InstituteUL1TR001082 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2013 to 2017
$48.0M
Stress- and Promoter-Specific Mechanisms of Transcritpional Activation by p53R01CA117907 · NCI · UNIVERSITY OF COLORADO DENVER · PI ESPINOSA, JOAQUIN M. · 2006 to 2022
$4.4M
Aging-associated alterations in adaptive landscapes and the evolution of leukemiaR01CA180175 · NCI · UNIVERSITY OF COLORADO DENVER · PI DEGREGORI, JAMES V · 2013 to 2018
$1.8M
The Role of Trisomy 21 in Hematopoiesis and LeukemogenesisF31CA196231 · NCI · UNIVERSITY OF COLORADO DENVER · PI LIGGETT, LUTHER ALEXANDER · 2015 to 2018
$121k
NCATS NIH HHS UL1 TR001082NCI NIH HHS F31 CA196231NCI NIH HHS P30 CA046934NCI NIH HHS R01 CA117907NCI NIH HHS R01 CA180175
6 · The paper itself

Abstract

Although it is clear that trisomy 21 causes Down syndrome, the molecular events acting downstream of the trisomy remain ill defined. Using complementary genomics analyses, we identified the interferon pathway as the major signaling cascade consistently activated by trisomy 21 in human cells. Transcriptome analysis revealed that trisomy 21 activates the interferon transcriptional response in fibroblast and lymphoblastoid cell lines, as well as circulating monocytes and T cells. Trisomy 21 cells show increased induction of interferon-stimulated genes and decreased expression of ribosomal proteins and translation factors. An shRNA screen determined that the interferon-activated kinases JAK1 and TYK2 suppress proliferation of trisomy 21 fibroblasts, and this defect is rescued by pharmacological JAK inhibition. Therefore, we propose that interferon activation, likely via increased gene dosage of the four interferon receptors encoded on chromosome 21, contributes to many of the clinical impacts of trisomy 21, and that interferon antagonists could have therapeutic benefits.

Indexed as

Immunity, InnateCells, CulturedDown SyndromeFibroblastsGene Expression ProfilingHumansInterferonsMonocytesT-LymphocytesInterferonschromosomesdown syndromegeneshumanhuman biologyinterferonJAK inhibitorsmedicinemouseruxolitinibtrisomy 21

Identifiers

PMID27472900
PMCPMC5012864
OpenAlexW2487528628

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.