Evidence map›Paper›PMID 27471951›Full record

ArticleVisual neuroscience2016

CACNA1S expression in mouse retina: Novel isoforms and antibody cross-reactivity with GPR179.

Nazarul Hasan, Thomas A Ray, Ronald G Gregg

Abstract read
In one paragraph

Article in Visual neuroscience, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Multiple Calcium Channel Types with Unique Expression Patterns Mediate Retinal Signaling at Bipolar Cell Ribbon Synapses.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  8. AMIGO1 Promotes Axon Growth and Territory Matching in the Retina.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Skeletal muscle CaPflugers Archiv : European journal of physiology · 2020
    Review
  13. Article
  14. Article
  15. Reduced expression of theMolecular vision · 2019
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. A missense mutation inJournal of neurophysiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Nazarul HasanDepartment of Biochemistry & Molecular Genetics,University of Louisville,Louisville,Kentucky.
Thomas A RayDepartment of Biochemistry & Molecular Genetics,University of Louisville,Louisville,Kentucky.
Ronald G GreggDepartment of Biochemistry & Molecular Genetics,University of Louisville,Louisville,Kentucky.ORCID 0000-0001-5805-224X
University of Louisville · US

Funding

ISOLATION OF CONGENITAL STATIONARY NIGHT BLINDNESS GENESR01EY012354 · NEI · UNIVERSITY OF LOUISVILLE · PI GREGG, RONALD G, HASAN, NAZARUL · 1999 to 2021
$7.6M
NEI NIH HHS R01 EY012354
6 · The paper itself

Abstract

Cacna1s encodes the α1S subunit (Cav1.1) of voltage-dependent calcium channels, and is required for normal skeletal and cardiac muscle function, where it couples with the ryanodine receptor to regulate muscle contraction. Recently CACNA1S was reported to be expressed on the tips of retinal depolarizing bipolar cells (DBCs) and colocalized with metabotropic glutamate receptor 6 (mGluR6), which is critical to DBC signal transduction. Further, in mGluR6 knockout mice, expression at this location is down regulated. We examined RNAseq data from mouse retina and found expression of a novel isoform of Cacna1s. To determine if CACNA1S was a functional component of the DBC signal transduction cascade, we performed immunohistochemistry to visualize its expression in several mouse lines that lack DBC function. Immunohistochemical staining with antibodies to CACNA1S show punctate labeling at the tips of DBCs in wild type (WT) retinas that are absent in Gpr179 nob5 mutant retinas and decreased in Grm6 -/- mouse retinas. CACNA1S and transient receptor potential cation channel, subfamily M, member 1 (TRPM1) staining also colocalized in WT retinas. Western blot analyses for CACNA1S of either retinal lysates or proteins after immunoprecipitation with the CACNA1S antibody failed to show the presence of bands expected for CACNA1S. Mass spectrometric analysis of CACNA1S immunoprecipitated proteins also failed to detect any peptides matching CACNA1S. Immunohistochemistry and western blotting after expression of GPR179 in HEK293T cells indicate that the CACNA1S antibody used here and in the retinal studies published to date, cross-reacts with GPR179. These data suggest caution should be exercised in conferring a role for CACNA1S in DBC signal transduction based solely on immunohistochemical staining.

Indexed as

Antigen-Antibody ReactionsAmino Acid SequenceAnimalsBlotting, WesternCalcium Channels, L-TypeCross ReactionsFemaleGene Expression RegulationHEK293 CellsHumansImmunohistochemistryImmunologic Deficiency SyndromesMaleMass SpectrometryMiceMice, KnockoutCACNA1S protein, mouseCalcium Channels, L-TypeGPR179 protein, mouseProtein IsoformsReceptors, G-Protein-CoupledRNA, MessengerAntibody cross-reactivityBipolar cellsCACNA1SGPR179Retina

Identifiers

PMID27471951
PMCPMC6815669
OpenAlexW2506449824

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.