Evidence map›Paper›PMID 27471054›Full record

ArticleScientific reports2016

Pyruvate dehydrogenase kinase regulates hepatitis C virus replication.

Gwon-Soo Jung, Jae-Han Jeon, Yeon-Kyung Choi, Se Young Jang, Soo Young Park, Sung-Woo Kim, Jun-Kyu Byun, Mi-Kyung Kim, Sungwoo Lee, Eui-Cheol Shin and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 46 citations in OpenAlex.

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  15. Viral Infection Modulates Mitochondrial Function.International journal of molecular sciences · 2021
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  16. Frontiers in pharmacology · 2021
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  20. Oxygen: viral friend or foe?Virology journal · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Gwon-Soo JungDepartment of Internal Medicine, Kyungpook National University School of Medicine, Daegu, Republic of Korea.
Jae-Han JeonDepartment of Internal Medicine, Kyungpook National University School of Medicine, Daegu, Republic of Korea.
Yeon-Kyung ChoiDepartment of Internal Medicine, Kyungpook National University School of Medicine, Daegu, Republic of Korea.
Se Young JangDepartment of Internal Medicine, Kyungpook National University School of Medicine, Daegu, Republic of Korea.
Soo Young ParkDepartment of Internal Medicine, Kyungpook National University School of Medicine, Daegu, Republic of Korea.
Sung-Woo KimDepartment of Internal Medicine, Kyungpook National University School of Medicine, Daegu, Republic of Korea.
Jun-Kyu ByunLeading-edge Research Center for Diabetes and Metabolic Disease, Kyungpook National University Hospital, Daegu, Republic of Korea.
Mi-Kyung KimDepartment of Internal Medicine, Keimyung University School of Medicine, Daegu, Republic of Korea.
Sungwoo LeeNew Drug Development Center, Daegu-Gyeongbuk Medical Innovation Foundation, Daegu, Republic of Korea.
Eui-Cheol ShinLaboratory of Immunology and Infectious Diseases, Graduate School of Medical Science and Engineering, KAIST, Daejeon, Republic of Korea.
In-Kyu LeeDepartment of Internal Medicine, Kyungpook National University School of Medicine, Daegu, Republic of Korea.
Yu Na KangDepartment of Pathology, Keimyung University School of Medicine, Daegu, Republic of Korea.
Keun-Gyu ParkDepartment of Internal Medicine, Kyungpook National University School of Medicine, Daegu, Republic of Korea.
Kyungpook National University · KRKyungpook National University Hospital · KRKeimyung University · KRDaegu-Gyeongbuk Medical Innovation Foundation · KRKorea Advanced Institute of Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During replication, hepatitis C virus (HCV) utilizes macromolecules produced by its host cell. This process requires host cellular metabolic reprogramming to favor elevated levels of aerobic glycolysis. Therefore, we evaluated whether pyruvate dehydrogenase kinase (PDK), a mitochondrial enzyme that promotes aerobic glycolysis, can regulate HCV replication. Levels of c-Myc, hypoxia-inducible factor-1α (HIF-1α), PDK1, PDK3, glucokinase, and serine biosynthetic enzymes were compared between HCV-infected and uninfected human liver and Huh-7.5 cells infected with or without HCV. Protein and mRNA expression of c-Myc, HIF-1α, and glycolytic enzymes were significantly higher in HCV-infected human liver and hepatocytes than in uninfected controls. This increase was accompanied by upregulation of serine biosynthetic enzymes, suggesting cellular metabolism was altered toward facilitated nucleotide synthesis essential for HCV replication. JQ1, a c-Myc inhibitor, and dichloroacetate (DCA), a PDK inhibitor, decreased the expression of glycolytic and serine synthetic enzymes in HCV-infected hepatocytes, resulting in suppressed viral replication. Furthermore, when co-administered with IFN-α or ribavirin, DCA further inhibited viral replication. In summary, HCV reprograms host cell metabolism to favor glycolysis and serine biosynthesis; this is mediated, at least in part, by increased PDK activity, which provides a surplus of nucleotide precursors. Therefore, blocking PDK activity might have therapeutic benefits against HCV replication.

Indexed as

AdultAgedAntiviral AgentsAzepinesCell LineDichloroacetic AcidGlucokinaseGlycolysisHepacivirusHepatocytesHumansHypoxia-Inducible Factor 1, alpha SubunitInterferon-alphaLiverMiddle AgedProtein Serine-Threonine KinasesAntiviral AgentsAzepinesDichloroacetic AcidGlucokinaseHypoxia-Inducible Factor 1, alpha SubunitInterferon-alpha(+)-JQ1 compoundPDK1 protein, humanPDK3 protein, humanProtein Serine-Threonine KinasesProto-Oncogene Proteins c-mycPyruvate Dehydrogenase Acetyl-Transferring KinaseRibavirinTriazoles

Identifiers

PMID27471054
PMCPMC4965757
OpenAlexW2486376398

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.