Evidence map›Paper›PMID 27468930›Full record

ArticleScientific reports2016

High throughput screening of starch structures using carbohydrate microarrays.

Vanja Tanackovic, Maja Gro Rydahl, Henriette Lodberg Pedersen, Mohammed Saddik Motawia, Shahnoor Sultana Shaik, Maria Dalgaard Mikkelsen, Susanne Langgaard Krunic, Jonatan Ulrik Fangel, William George Tycho Willats, Andreas Blennow

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Novel Design of an α-Amylase with an N-Terminal CBM20 inMolecules (Basel, Switzerland) · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Vanja TanackovicDepartment of Plant and Environmental Sciences, University of Copenhagen, Denmark.
Maja Gro RydahlDepartment of Plant and Environmental Sciences, University of Copenhagen, Denmark.
Henriette Lodberg PedersenDepartment of Plant and Environmental Sciences, University of Copenhagen, Denmark.
Mohammed Saddik MotawiaDepartment of Plant and Environmental Sciences, University of Copenhagen, Denmark.
Shahnoor Sultana ShaikDepartment of Plant and Environmental Sciences, University of Copenhagen, Denmark.
Maria Dalgaard MikkelsenDepartment of Plant and Environmental Sciences, University of Copenhagen, Denmark.
Susanne Langgaard KrunicDepartment of Plant and Environmental Sciences, University of Copenhagen, Denmark.
Jonatan Ulrik FangelDepartment of Plant and Environmental Sciences, University of Copenhagen, Denmark.
William George Tycho WillatsDepartment of Plant and Environmental Sciences, University of Copenhagen, Denmark.
Andreas BlennowDepartment of Plant and Environmental Sciences, University of Copenhagen, Denmark.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study we introduce the starch-recognising carbohydrate binding module family 20 (CBM20) from Aspergillus niger for screening biological variations in starch molecular structure using high throughput carbohydrate microarray technology. Defined linear, branched and phosphorylated maltooligosaccharides, pure starch samples including a variety of different structures with variations in the amylopectin branching pattern, amylose content and phosphate content, enzymatically modified starches and glycogen were included. Using this technique, different important structures, including amylose content and branching degrees could be differentiated in a high throughput fashion. The screening method was validated using transgenic barley grain analysed during development and subjected to germination. Typically, extreme branching or linearity were detected less than normal starch structures. The method offers the potential for rapidly analysing resistant and slowly digested dietary starches.

Indexed as

AmyloseAspergillus nigerCarbohydrate ConformationFungal ProteinsHordeumLectinsMicroarray AnalysisAmyloseFungal ProteinsLectins

Identifiers

PMID27468930
PMCPMC4965820

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.