Evidence map›Paper›PMID 27468385›Full record

ArticleSpringerPlus2016

Bacteria of the genus Rhodopseudomonas (Bradyrhizobiaceae): obligate symbionts in mycelial cultures of the black truffles Tuber melanosporum and Tuber brumale.

Christine Le Roux, Estelle Tournier, Adrien Lies, Hervé Sanguin, Gérard Chevalier, Robin Duponnois, Daniel Mousain, Yves Prin

Open access · diamondAbstract read
In one paragraph

Article in SpringerPlus, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Black Truffles AffectFrontiers in microbiology · 2022
    Article
  9. Article
  10. PeerJ · 2020
    Article
  11. Article
  12. A Genomotaxonomy View of theFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Christine Le RouxCIRAD, UMR LSTM, 34398 Montpellier Cedex 5, France.
Estelle TournierCIRAD, UMR LSTM, 34398 Montpellier Cedex 5, France.
Adrien LiesCIRAD, UMR LSTM, 34398 Montpellier Cedex 5, France.
Hervé SanguinCIRAD, UMR LSTM, 34398 Montpellier Cedex 5, France.
Gérard ChevalierINRA Centre de Recherche de Clermont-Theix, 63039 Clermont-Ferrand Cedex, France.
Robin DuponnoisIRD, UMR LSTM, 34398 Montpellier Cedex 5, France.
Daniel MousainSociété d'Horticulture et d'Histoire Naturelle de l'Hérault, Parc à Ballon 1, bâtiment B, 125 rue du Moulin de Sémalen, 34000 Montpellier, France.
Yves PrinCIRAD, UMR LSTM, 34398 Montpellier Cedex 5, France.
Laboratoire des Symbioses Tropicales et Méditerranéennes · FRCEA Le Ripault · FRCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThis work aimed at characterizing 12 isolates of the genus Tuber including Tuber melanosporum (11 isolates) and Tuber brumale (one isolate). This was done using internal transcribed spacer (ITS) sequences, confirming their origin.

resultsAnalysis of their mating type revealed that both MAT1-1 and MAT1-2 exist within these isolates (with 3 and 8 of each, respectively). We observed that each of these cultures was consistently associated with one bacterium that was intimately linked to fungal growth. These bacterial associates failed to grow in the absence of fungus. We extracted DNA from bacterial colonies in the margin of mycelium and sequenced a nearly complete 16S rDNA gene and a partial ITS fragment. We found they all belonged to the genus Rhodopseudomonas, fitting within different phylogenetic clusters. No relationships were evidenced between bacterial and fungal strains or mating types. Rhodopseudomonas being a sister genus to Bradyrhizobium, we tested the nodulation ability of these bacteria on a promiscuously nodulating legume (Acacia mangium), without success. We failed to identify any nifH genes among these isolates, using two different sets of primers.

conclusionsWhile the mechanisms of interaction between Tuber and Rhodopseudomonas remain to be elucidated, their interdependency for in vitro growth seems a novel feature of this fungus.

Indexed as

AscomyceteCultivabilityIn vitro productionProcaryoteTruffle

Identifiers

PMID27468385
PMCPMC4947074
OpenAlexW2470023668

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.