Evidence map›Paper›PMID 27467510›Full record

ArticlePloS one2016

Silencing the Transcriptional Repressor, ZCT1, Illustrates the Tight Regulation of Terpenoid Indole Alkaloid Biosynthesis in Catharanthus roseus Hairy Roots.

Noreen F Rizvi, Jessica D Weaver, Erin J Cram, Carolyn W T Lee-Parsons

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  6. Review
  7. Extracts ofMolecules (Basel, Switzerland) · 2022
    Article
  8. Understanding the possible influence ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  9. Review
  10. Review
  11. Article
  12. ZCTs knockdown using antisense LNA GapmeR in specialized photomixotrophic cell suspensions ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  13. Repression ofPeerJ · 2021
    Article
  14. Article
  15. The regulation ofPlant direct · 2019
    Article
  16. croFGD:Frontiers in genetics · 2019
    Article
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Noreen F RizviDepartment of Chemical Engineering, Northeastern University, Boston, Massachusetts, 02115, United States of America.
Jessica D WeaverDepartment of Biology, Northeastern University, Boston, Massachusetts, 02115, United States of America.
Erin J CramDepartment of Biology, Northeastern University, Boston, Massachusetts, 02115, United States of America.
Carolyn W T Lee-ParsonsDepartment of Chemical Engineering, Northeastern University, Boston, Massachusetts, 02115, United States of America.
Northeastern University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Catharanthus roseus plant is the source of many valuable terpenoid indole alkaloids (TIAs), including the anticancer compounds vinblastine and vincristine. Transcription factors (TFs) are promising metabolic engineering targets due to their ability to regulate multiple biosynthetic pathway genes. To increase TIA biosynthesis, we elicited the TIA transcriptional activators (ORCAs and other unidentified TFs) with the plant hormone, methyl jasmonate (MJ), while simultaneously silencing the expression of the transcriptional repressor ZCT1. To silence ZCT1, we developed transgenic hairy root cultures of C. roseus that expressed an estrogen-inducible Zct1 hairpin for activating RNA interference. The presence of 17β-estradiol (5μM) effectively depleted Zct1 in hairy root cultures elicited with MJ dosages that either optimize or inhibit TIA production (250 or 1000μM). However, silencing Zct1 was not sufficient to increase TIA production or the expression of the TIA biosynthetic genes (G10h, Tdc, and Str), illustrating the tight regulation of TIA biosynthesis. The repression of the TIA biosynthetic genes at the inhibitory MJ dosage does not appear to be solely regulated by ZCT1. For instance, while Zct1 and Zct2 levels decreased through activating the Zct1 hairpin, Zct3 levels remained elevated. Since ZCT repressors have redundant yet distinct functions, silencing all three ZCTs may be necessary to relieve their repression of alkaloid biosynthesis.

Indexed as

Gene SilencingTranscription, GeneticCatharanthusPlant RootsPlants, Genetically ModifiedRepressor ProteinsRNA InterferenceSecologanin Tryptamine AlkaloidsRepressor ProteinsSecologanin Tryptamine Alkaloids

Identifiers

PMID27467510
PMCPMC4965073
OpenAlexW2479501302

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.