Evidence map›Paper›PMID 27467070›Full record

ArticlePLoS genetics2016

Selection on a Subunit of the NURF Chromatin Remodeler Modifies Life History Traits in a Domesticated Strain of Caenorhabditis elegans.

Edward E Large, Wen Xu, Yuehui Zhao, Shannon C Brady, Lijiang Long, Rebecca A Butcher, Erik C Andersen, Patrick T McGrath

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Review
  3. Genome research · 2024
    Article
  4. Review
  5. Article
  6. Chromatin: the old and young of it.Frontiers in molecular biosciences · 2023
    Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. The AncestralG3 (Bethesda, Md.) · 2020
    Article
  13. Article
  14. WormQTL2: an interactive platform for systems genetics in Caenorhabditis elegans.Database : the journal of biological databases and curation · 2020
    Article
  15. Dissecting the eQTL Micro-Architecture inFrontiers in genetics · 2020
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Edward E LargeSchool of Biology, Georgia Institute of Technology, Atlanta, Georgia, United States of America.
Wen XuSchool of Biology, Georgia Institute of Technology, Atlanta, Georgia, United States of America.ORCID 0000-0003-2085-7223
Yuehui ZhaoSchool of Biology, Georgia Institute of Technology, Atlanta, Georgia, United States of America.
Shannon C BradyDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, United States of America.ORCID 0000-0002-3043-1544
Lijiang LongSchool of Biology, Georgia Institute of Technology, Atlanta, Georgia, United States of America.
Rebecca A ButcherDepartment of Chemistry, University of Florida, Gainesville, Florida, United States of America.
Erik C AndersenDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, United States of America.
Patrick T McGrathSchool of Biology, Georgia Institute of Technology, Atlanta, Georgia, United States of America.
Georgia Institute of Technology · USNorthwestern University · USUniversity of Florida · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
Developing Capacity to Evaluate Training Programs via Development of Human, Institutional and Social CapitalT32GM008449 · NIGMS · NORTHWESTERN UNIVERSITY · PI LEONARD, JOSHUA NATHANIEL · 1993 to 2023
$7.8M
Mechanistic understanding of age-dependent genetic architectureR01GM114170 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI MCGRATH, PATRICK T · 2015 to 2019
$1.5M
Evolving multigenic extensions to lifespanR21AG050304 · NIA · GEORGIA INSTITUTE OF TECHNOLOGY · PI LU, HANG, MCGRATH, PATRICK T · 2015 to 2016
$391k
NCI NIH HHS P30 CA060553NIA NIH HHS R21 AG050304NIGMS NIH HHS R01 GM114170NIGMS NIH HHS T32 GM008449
6 · The paper itself

Abstract

Evolutionary life history theory seeks to explain how reproductive and survival traits are shaped by selection through allocations of an individual's resources to competing life functions. Although life-history traits evolve rapidly, little is known about the genetic and cellular mechanisms that control and couple these tradeoffs. Here, we find that two laboratory-adapted strains of C. elegans descended from a single common ancestor that lived in the 1950s have differences in a number of life-history traits, including reproductive timing, lifespan, dauer formation, growth rate, and offspring number. We identified a quantitative trait locus (QTL) of large effect that controls 24%-75% of the total trait variance in reproductive timing at various timepoints. Using CRISPR/Cas9-induced genome editing, we show this QTL is due in part to a 60 bp deletion in the 3' end of the nurf-1 gene, which is orthologous to the human gene encoding the BPTF component of the NURF chromatin remodeling complex. Besides reproduction, nurf-1 also regulates growth rate, lifespan, and dauer formation. The fitness consequences of this deletion are environment specific-it increases fitness in the growth conditions where it was fixed but decreases fitness in alternative laboratory growth conditions. We propose that chromatin remodeling, acting through nurf-1, is a pleiotropic regulator of life history trade-offs underlying the evolution of multiple traits across different species.

Indexed as

Evolution, MolecularAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsChromatinChromatin Assembly and DisassemblyChromosomal Proteins, Non-HistoneCRISPR-Cas SystemsHumansPhenotypeQuantitative Trait LociReproductionSelection, GeneticCaenorhabditis elegans ProteinsChromatinChromosomal Proteins, Non-HistoneNURF-1 protein, C elegans

Identifiers

PMID27467070
PMCPMC4965130
OpenAlexW2494829200

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.