Evidence map›Paper›PMID 27466407›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Gambogic acid identifies an isoform-specific druggable pocket in the middle domain of Hsp90β.

Kendrick H Yim, Thomas L Prince, Shiwei Qu, Fang Bai, Patricia A Jennings, José N Onuchic, Emmanuel A Theodorakis, Leonard Neckers

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 62 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Kendrick H YimUrologic Oncology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892;
Thomas L PrinceUrologic Oncology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892;
Shiwei QuDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093;
Fang BaiCenter for Theoretical Biological Physics, Rice University, Houston, TX 77005;
Patricia A JenningsDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093;
José N OnuchicCenter for Theoretical Biological Physics, Rice University, Houston, TX 77005; Department of Physics and Astronomy, Rice University, Houston, TX 77005; Department of Chemistry, Rice University, Houston, TX 77005; Department of Biosciences, Rice University, Houston, TX 77005.
Emmanuel A TheodorakisDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093;
Leonard NeckersUrologic Oncology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892; neckersl@mail.nih.gov.
University of California, San Diego · USCenter for Cancer Research · USCenter for Theoretical Biological Physics · USNational Institutes of Health · US

Funding

Role of HSP90 Family Chaperone Proteins in Cellular Signal TransductionZIASC010074 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI NECKERS, LEONARD · 2009 to 2025
$13.3M
ROLE OF HSP90/GFP94 CHAPERONE PROTEINS IN CELLULAR SIGNAL TRANSDUCTIONZ01SC010074 · SC · DIVISION OF CLINICAL SCIENCES - NCI · PI NECKERS, LEONARD · 1996 to 2008
$3.7M
Chemical Biology of Caged Garcinia XanthonesR01CA133002 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI THEODORAKIS, EMMANUEL A · 2008 to 2012
$1.3M
The New Family of NEET Proteins: 2Fe-2S Protein Mediated Health and DiseaseR01GM101467 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JENNINGS, PATRICIA A · 2012 to 2015
$1.3M
Intramural NIH HHS Z01 SC010074NCI NIH HHS R01 CA133002NIGMS NIH HHS R01 GM101467
6 · The paper itself

Abstract

Because of their importance in maintaining protein homeostasis, molecular chaperones, including heat-shock protein 90 (Hsp90), represent attractive drug targets. Although a number of Hsp90 inhibitors are in preclinical/clinical development, none strongly differentiate between constitutively expressed Hsp90β and stress-induced Hsp90α, the two cytosolic paralogs of this molecular chaperone. Thus, the importance of inhibiting one or the other paralog in different disease states remains unknown. We show that the natural product, gambogic acid (GBA), binds selectively to a site in the middle domain of Hsp90β, identifying GBA as an Hsp90β-specific Hsp90 inhibitor. Furthermore, using computational and medicinal chemistry, we identified a GBA analog, referred to as DAP-19, which binds potently and selectively to Hsp90β. Because of its unprecedented selectivity for Hsp90β among all Hsp90 paralogs, GBA thus provides a new chemical tool to study the unique biological role of this abundantly expressed molecular chaperone in health and disease.

Indexed as

Computer SimulationHEK293 CellsHSP90 Heat-Shock ProteinsHumansMutagenesis, Site-DirectedProtein DomainsProtein IsoformsXanthonesgambogic acidHSP90AB1 protein, humanHSP90 Heat-Shock ProteinsProtein IsoformsXanthonescaged xanthoneheat-shock protein 90isoform-specific inhibitormolecular chaperonemolecular docking

Identifiers

PMID27466407
PMCPMC4995996
OpenAlexW2486782373

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.