Evidence map›Paper›PMID 27466361›Full record

ArticleThe Journal of biological chemistry2016

Secretion of the Intimin Passenger Domain Is Driven by Protein Folding.

Jack C Leo, Philipp Oberhettinger, Shogo Yoshimoto, D B R K Gupta Udatha, J Preben Morth, Monika Schütz, Katsutoshi Hori, Dirk Linke

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  5. Review
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  9. Article
  10. Review
  11. Evolving Accelerated Amidation by SpyTag/SpyCatcher to Analyze Membrane Dynamics.Angewandte Chemie (International ed. in English) · 2017
    Article
  12. A New Strain Collection for Improved Expression of Outer Membrane Proteins.Frontiers in cellular and infection microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Jack C LeoFrom the Evolution and Genetics, Department of Biosciences, University of Oslo, 0316 Oslo, Norway.
Philipp OberhettingerInterfaculty Institute for Microbiology and Infection Medicine, University Clinics Tübingen, 72076 Tübingen, Germany.
Shogo YoshimotoDepartment of Biotechnology, Graduate School of Engineering, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8603, Japan, and.
D B R K Gupta UdathaFrom the Evolution and Genetics, Department of Biosciences, University of Oslo, 0316 Oslo, Norway.
J Preben MorthCentre for Molecular Medicine Norway, 0318 Oslo, Norway.
Monika SchützInterfaculty Institute for Microbiology and Infection Medicine, University Clinics Tübingen, 72076 Tübingen, Germany.
Katsutoshi HoriDepartment of Biotechnology, Graduate School of Engineering, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8603, Japan, and.
Dirk LinkeFrom the Evolution and Genetics, Department of Biosciences, University of Oslo, 0316 Oslo, Norway, dirk.linke@ibv.uio.no.ORCID 0000-0003-3150-6752
University of Oslo · NONagoya University · JPUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intimin is an essential adhesin of attaching and effacing organisms such as entropathogenic Escherichia coli It is also the prototype of type Ve secretion or inverse autotransport, where the extracellular C-terminal region or passenger is exported with the help of an N-terminal transmembrane β-barrel domain. We recently reported a stalled secretion intermediate of intimin, where the passenger is located in the periplasm but the β-barrel is already inserted into the membrane. Stalling of this mutant is due to the insertion of an epitope tag at the very N terminus of the passenger. Here, we examined how this insertion disrupts autotransport and found that it causes misfolding of the N-terminal immunoglobulin (Ig)-like domain D00. We could also stall the secretion by making an internal deletion in D00, and introducing the epitope tag into the second Ig-like domain, D0, also resulted in reduced passenger secretion. In contrast to many classical autotransporters, where a proximal folding core in the passenger is required for secretion, the D00 domain is dispensable, as the passenger of an intimin mutant lacking D00 entirely is efficiently exported. Furthermore, the D00 domain is slightly less stable than the D0 and D1 domains, unfolding at ∼200 piconewtons (pN) compared with ∼250 pN for D0 and D1 domains as measured by atomic force microscopy. Our results support a model where the secretion of the passenger is driven by sequential folding of the extracellular Ig-like domains, leading to vectorial transport of the passenger domain across the outer membrane in an N to C direction.

Indexed as

Models, BiologicalProtein FoldingAdhesins, BacterialEnteropathogenic Escherichia coliEscherichia coli ProteinsProtein DomainsAdhesins, BacterialeaeA protein, E coliEscherichia coli Proteinsatomic force microscopy (AFM)bacterial pathogenesisimmunoglobulin-like domainprotein foldingprotein secretiontype V secretion system

Identifiers

PMID27466361
PMCPMC5025694
OpenAlexW2503399269

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.