Evidence map›Paper›PMID 27463134›Full record

ArticleBiophysical journal2016

pH-Dependent Interactions in Dimers Govern the Mechanics and Structure of von Willebrand Factor.

Jochen P Müller, Achim Löf, Salomé Mielke, Tobias Obser, Linda K Bruetzel, Willem Vanderlinden, Jan Lipfert, Reinhard Schneppenheim, Martin Benoit

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Article in Biophysical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Jochen P MüllerDepartment of Physics and Center for Nanoscience, LMU Munich, Munich, Germany. Electronic address: jochen.mueller@physik.uni-muenchen.de.
Achim LöfDepartment of Physics and Center for Nanoscience, LMU Munich, Munich, Germany.
Salomé MielkeDepartment of Physics and Center for Nanoscience, LMU Munich, Munich, Germany.
Tobias ObserDepartment of Pediatric Hematology and Oncology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Linda K BruetzelDepartment of Physics and Center for Nanoscience, LMU Munich, Munich, Germany.
Willem VanderlindenDepartment of Physics and Center for Nanoscience, LMU Munich, Munich, Germany; Department of Chemistry, Division of Molecular Imaging and Photonics, KU Leuven-University of Leuven, Leuven, Belgium.
Jan LipfertDepartment of Physics and Center for Nanoscience, LMU Munich, Munich, Germany.
Reinhard SchneppenheimDepartment of Pediatric Hematology and Oncology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Martin BenoitDepartment of Physics and Center for Nanoscience, LMU Munich, Munich, Germany.
Center for NanoScience · DEUniversität Hamburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Von Willebrand factor (VWF) is a multimeric plasma glycoprotein that is activated for hemostasis by increased hydrodynamic forces at sites of vascular injury. Here, we present data from atomic force microscopy-based single-molecule force measurements, atomic force microscopy imaging, and small-angle x-ray scattering to show that the structure and mechanics of VWF are governed by multiple pH-dependent interactions with opposite trends within dimeric subunits. In particular, the recently discovered strong intermonomer interaction, which induces a firmly closed conformation of dimers and crucially involves the D4 domain, was observed with highest frequency at pH 7.4, but was essentially absent at pH values below 6.8. However, below pH 6.8, the ratio of compact dimers increased with decreasing pH, in line with a previous transmission electron microscopy study. These findings indicated that the compactness of dimers at pH values below 6.8 is promoted by other interactions that possess low mechanical resistance compared with the strong intermonomer interaction. By investigating deletion constructs, we found that compactness under acidic conditions is primarily mediated by the D4 domain, i.e., remarkably by the same domain that also mediates the strong intermonomer interaction. As our data suggest that VWF has the highest mechanical resistance at physiological pH, local deviations from physiological pH (e.g., at sites of vascular injury) may represent a means to enhance VWF's hemostatic activity where needed.

Indexed as

Mechanical PhenomenaProtein MultimerizationAmino Acid SequenceBiomechanical PhenomenaHEK293 CellsHumansHydrogen-Ion ConcentrationImidazolesProtein Structure, Quaternaryvon Willebrand FactorimidazoleImidazolesvon Willebrand Factor

Identifiers

PMID27463134
PMCPMC4968480
OpenAlexW2491805236

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.