ArticleFrontiers in plant science2016
Genome Wide Association Mapping in Arabidopsis thaliana Identifies Novel Genes Involved in Linking Allyl Glucosinolate to Altered Biomass and Defense.
Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed, 56 citations in OpenAlex.
- Unraveling the genetic basis of Rhizobium rhizogenes-mediated transformation and hairy root formation in rose using a genome-wide association study.Plant cell reports · 2024Article
- Multi-omics identification of a key glycosyl hydrolase gene FtGH1 involved in rutin hydrolysis in Tartary buckwheat (Fagopyrum tataricum).Plant biotechnology journal · 2024Article
- Depicting the genetic and metabolic panorama of chemical diversity in the tea plant.Plant biotechnology journal · 2024Article
- Analysis of the Genetic Diversity in Tea Plant Germplasm in Fujian Province Based on Restriction Site-Associated DNA Sequencing.Plants (Basel, Switzerland) · 2023Article
- Plant-herbivore interactions: Experimental demonstration of genetic variability in plant-plant signalling.Evolutionary applications · 2023Article
- Mapping Genetic Variation in Arabidopsis in Response to Plant Growth-Promoting BacteriumMicroorganisms · 2023Article
- Natural variation in the transcription factor REPLUMLESS contributes to both disease resistance and plant growth in Arabidopsis.Plant communications · 2022Article
- Genome-wide association of the metabolic shifts underpinning dark-induced senescence in Arabidopsis.The Plant cell · 2022Article
- Evolution of A bHLH Interaction Motif.International journal of molecular sciences · 2021Article
- Diverse Allyl Glucosinolate Catabolites Independently Influence Root Growth and Development.Plant physiology · 2020Article
- Pre- and Post-harvest Factors Affecting Glucosinolate Content in Broccoli.Frontiers in nutrition · 2020Review
- Remodeling of Root Growth Under Combined Arsenic and Hypoxia Stress Is Linked to Nutrient Deprivation.Frontiers in plant science · 2020Article
- Genome-Wide Association Study of Major Agronomic Traits in Foxtail Millet (Setaria italica L.) Using ddRAD Sequencing.Scientific reports · 2019Article
- Interactions of Tomato andThe Plant cell · 2019Article
- Coordination of Glucosinolate Biosynthesis and Turnover Under Different Nutrient Conditions.Frontiers in plant science · 2019Article
- Atypical Myrosinase as a Mediator of Glucosinolate Functions in Plants.Frontiers in plant science · 2019Review
- Digital Imaging Combined with Genome-Wide Association Mapping Links Loci to Plant-Pathogen Interaction Traits.Plant physiology · 2018Article
- Genome-wide association mapping in Arabidopsis identifies novel genes underlying quantitative disease resistance to Alternaria brassicae.Molecular plant pathology · 2018Article
- Article
- RXLR Effector AVR2 Up-Regulates a Brassinosteroid-Responsive bHLH Transcription Factor to Suppress Immunity.Plant physiology · 2017Article
Corrections and comments
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Authors and funding
9 authors at 3 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A key limitation in modern biology is the ability to rapidly identify genes underlying newly identified complex phenotypes. Genome wide association studies (GWAS) have become an increasingly important approach for dissecting natural variation by associating phenotypes with genotypes at a genome wide level. Recent work is showing that the Arabidopsis thaliana defense metabolite, allyl glucosinolate (GSL), may provide direct feedback regulation, linking defense metabolism outputs to the growth, and defense responses of the plant. However, there is still a need to identify genes that underlie this process. To start developing a deeper understanding of the mechanism(s) that modulate the ability of exogenous allyl GSL to alter growth and defense, we measured changes in plant biomass and defense metabolites in a collection of natural 96 A. thaliana accessions fed with 50 μM of allyl GSL. Exogenous allyl GSL was introduced exclusively to the roots and the compound transported to the leaf leading to a wide range of heritable effects upon plant biomass and endogenous GSL accumulation. Using natural variation we conducted GWAS to identify a number of new genes which potentially control allyl responses in various plant processes. This is one of the first instances in which this approach has been successfully utilized to begin dissecting a novel phenotype to the underlying molecular/polygenic basis.
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