Evidence map›Paper›PMID 27462320›Full record

ArticleFrontiers in plant science2016

Plasticity of the Berry Ripening Program in a White Grape Variety.

Silvia Dal Santo, Marianna Fasoli, Stefano Negri, Erica D'Incà, Nazareno Vicenzi, Flavia Guzzo, Giovanni Battista Tornielli, Mario Pezzotti, Sara Zenoni

Abstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. The Role of Terroir on the Ripening Traits ofPlants (Basel, Switzerland) · 2024
    Article
  5. Article
  6. Article
  7. Article
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  11. Review
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  19. Article
  20. Long-Term Impact of Chemical and Alternative Fungicides Applied to GrapevineInternational journal of molecular sciences · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Silvia Dal SantoDepartment of Biotechnology, University of Verona Verona, Italy.
Marianna FasoliDepartment of Biotechnology, University of VeronaVerona, Italy; E & J Gallo WineryModesto, CA, USA.
Stefano NegriDepartment of Biotechnology, University of Verona Verona, Italy.
Erica D'IncàDepartment of Biotechnology, University of Verona Verona, Italy.
Nazareno VicenziUnione Consorzi Vini Veneti DOC Verona, Italy.
Flavia GuzzoDepartment of Biotechnology, University of Verona Verona, Italy.
Giovanni Battista TornielliDepartment of Biotechnology, University of Verona Verona, Italy.
Mario PezzottiDepartment of Biotechnology, University of Verona Verona, Italy.
Sara ZenoniDepartment of Biotechnology, University of Verona Verona, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Grapevine (Vitis vinifera L.) is considered one of the most environmentally sensitive crops and is characterized by broad phenotypic plasticity, offering important advantages such as the large range of different wines that can be produced from the same cultivar, and the adaptation of existing cultivars to diverse growing regions. The uniqueness of berry quality traits reflects complex interactions between the grapevine plant and the combination of natural factors and human cultural practices which leads to the expression of wine typicity. Despite the scientific and commercial importance of genotype interactions with growing conditions, few studies have characterized the genes and metabolites directly involved in this phenomenon. Here, we used two large-scale analytical approaches to explore the metabolomic and transcriptomic basis of the broad phenotypic plasticity of Garganega, a white berry variety grown at four sites characterized by different pedoclimatic conditions (altitudes, soil texture, and composition). These conditions determine berry ripening dynamics in terms of sugar accumulation and the abundance of phenolic compounds. Multivariate analysis unraveled a highly plastic metabolomic response to different environments, especially the accumulation of hydroxycinnamic and hydroxybenzoic acids and flavonols. Principal component analysis (PCA) revealed that the four sites strongly affected the berry transcriptome allowing the identification of environmentally-modulated genes and the plasticity of commonly-modulated transcripts at different sites. Many genes that control transcription, translation, transport, and carbohydrate metabolism showed different expression depending on the environmental conditions, indicating a key role in the observed transcriptomic plasticity of Garganega berries. Interestingly, genes representing the phenylpropanoid/flavonoid pathway showed plastic responses to the environment mirroring the accumulation of the corresponding metabolites. The comparison of Garganega and Corvina berries showed that the metabolism of phenolic compounds is more plastic in ripening Garganega berries under different pedoclimatic conditions.

Indexed as

berry ripeninggrapevinemetabolomicsphenolic compoundsplasticitytranscriptomics

Identifiers

PMID27462320
PMCPMC4940403

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.