Evidence map›Paper›PMID 27462317›Full record

ArticleFrontiers in immunology2016

Association Study for 26 Candidate Loci in Idiopathic Pulmonary Fibrosis Patients from Four European Populations.

Amit Kishore, Veronika Žižková, Lenka Kocourková, Jana Petrkova, Evangelos Bouros, Hilario Nunes, Vladimíra Loštáková, Joachim Müller-Quernheim, Gernot Zissel, Vitezslav Kolek and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 5 pooled it
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 5 syntheses or guidelines pooled it, 26 citations in OpenAlex.

  1. Common single nucleotide polymorphisms associated with idiopathic pulmonary fibrosis: a systematic review.European respiratory review : an official journal of the European Respiratory Society · 2024
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  9. Association of theFrontiers in genetics · 2025
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  15. Fibrosis: Lessons from OMICS analyses of the human lung.Matrix biology : journal of the International Society for Matrix Biology · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 4 countries.

Amit KishoreLaboratory of Immunogenomics, Department of Pathological Physiology, Faculty of Medicine and Dentistry, Palacký University , Olomouc , Czech Republic.
Veronika ŽižkováLaboratory of Immunogenomics, Department of Pathological Physiology, Faculty of Medicine and Dentistry, Palacký University , Olomouc , Czech Republic.
Lenka KocourkováLaboratory of Immunogenomics, Department of Pathological Physiology, Faculty of Medicine and Dentistry, Palacký University , Olomouc , Czech Republic.
Jana PetrkovaLaboratory of Immunogenomics, Department of Pathological Physiology, Faculty of Medicine and Dentistry, Palacký University , Olomouc , Czech Republic.
Evangelos BourosLaboratory of Pharmacology, University Hospital Alexandroupolis, Democritus University of Thrace , Athens , Greece.
Hilario NunesUniversité Paris 13, COMUE Sorbonne Paris Cité, Bobigny , Paris , France.
Vladimíra LoštákováDepartment of Respiratory Medicine, Faculty of Medicine and Dentistry, Palacký University , Olomouc , Czech Republic.
Joachim Müller-QuernheimDepartment of Pneumology, Center for Medicine, Medical Center, University of Freiburg , Freiburg , Germany.
Gernot ZisselDepartment of Pneumology, Center for Medicine, Medical Center, University of Freiburg , Freiburg , Germany.
Vitezslav KolekDepartment of Respiratory Medicine, Faculty of Medicine and Dentistry, Palacký University , Olomouc , Czech Republic.
Demosthenes BourosAcademic Department of Pneumonology, Hospital for Diseases of the Chest 'Sotiria', Medical School, University of Athens , Athens , Greece.
Dominique ValeyreUniversité Paris 13, COMUE Sorbonne Paris Cité, Bobigny , Paris , France.
Martin PetrekLaboratory of Immunogenomics, Department of Pathological Physiology, Faculty of Medicine and Dentistry, Palacký University, Olomouc, Czech Republic; Faculty of Medicine and Dentistry, Institute of Molecular and Translational Medicine, Palacký University and Faculty Hospital, Olomouc, Czech Republic.
Palacký University Olomouc · CZUniversity Medical Center Freiburg · DEDemocritus University of Thrace · GRInstitute of Molecular and Translational Medicine · CZNational and Kapodistrian University of Athens · GRUniversité Paris Cité · FRUniversité Sorbonne Paris Nord · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Idiopathic pulmonary fibrosis (IPF) affects lung parenchyma with progressing fibrosis. In this study, we aimed to replicate MUC5B rs35705950 variants and determine new plausible candidate variants for IPF among four different European populations. We genotyped 26 IPF candidate loci in 165 IPF patients from four European countries, such as Czech Republic (n = 41), Germany (n = 33), Greece (n = 40), France (n = 51), and performed association study comparing observed variant distribution with that obtained in a genetically similar Czech healthy control population (n = 96) described in our earlier data report. A highly significant association for a promoter variant (rs35705950) of mucin encoding MUC5B gene was observed in all IPF populations, individually and combined [odds ratio (95% confidence interval); p-value as 5.23 (8.94-3.06); 1.80 × 10(-11)]. Another non-coding variant, rs7934606 in MUC2 was significant among German patients [2.85 (5.05-1.60); 4.03 × 10(-4)] and combined European IPF cases [2.18 (3.16-1.50); 3.73 × 10(-5)]. The network analysis for these variants indicated gene-gene and gene-phenotype interactions in IPF and lung biology. With replication of MUC5B rs35705950 previously reported in U.S. populations of European descent and indicating other plausible polymorphic variants relevant for IPF, we provide additional reference information for future extended functional and population studies aimed, ideally with inclusion of clinical parameters, at identification of IPF genetic markers.

Indexed as

association studycytokinesidiopathic pulmonary fibrosisMUC2MUC5Bnetwork analysissequenom MassARRAYsingle nucleotide polymorphism

Identifiers

PMID27462317
PMCPMC4939450
OpenAlexW2465629559

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.