Evidence map›Paper›PMID 27461740›Full record

ArticleFEBS letters2016

Sequence-specific DNA binding by AT-hook motifs in MeCP2.

Matthew J Lyst, John Connelly, Cara Merusi, Adrian Bird

Open access · hybridAbstract readLetter
In one paragraph

Article in FEBS letters, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Rett Syndrome andNeuropsychiatric disease and treatment · 2022
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. A genome-wide analysis reveals the MeCP2-dependent regulation of genes in BGC-823 cells.International journal of clinical and experimental pathology · 2020
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Matthew J LystThe Wellcome Trust Centre for Cell Biology, University of Edinburgh, Edinburgh, UK.
John ConnellyThe Wellcome Trust Centre for Cell Biology, University of Edinburgh, Edinburgh, UK.
Cara MerusiThe Wellcome Trust Centre for Cell Biology, University of Edinburgh, Edinburgh, UK.
Adrian BirdThe Wellcome Trust Centre for Cell Biology, University of Edinburgh, Edinburgh, UK.
Wellcome Centre for Cell Biology · GBUniversity of Edinburgh · GB

Funding

Medical Research Council G0800401Wellcome Trust 107930/Z/15/Z
6 · The paper itself

Abstract

MeCP2 is a chromatin-associated protein that is mutated in Rett syndrome. Its methyl-CpG-binding domain interacts with DNA containing methylated cytosine, but other modes of recruitment to the genome have also been proposed. Here, we use in vitro and in vivo assays to investigate the DNA binding specificity of two AT-hook motifs in MeCP2. One exhibits robust sequence-specific DNA binding, whereas the other is a much weaker AT-hook. Our data indicate that these motifs are secondary contributors to DNA binding by MeCP2, and this view is supported by the absence of disease-causing missense mutations at these sites.

Indexed as

AT-Hook MotifsBase SequenceChromatinCytosineDNA-Binding ProteinsDNA MethylationHumansMethyl-CpG-Binding Protein 2Mutation, MissenseRett SyndromeChromatinCytosineDNA-Binding ProteinsMECP2 protein, humanMethyl-CpG-Binding Protein 2AT-hookMeCP2Rett syndrome

Identifiers

PMID27461740
PMCPMC5028900
OpenAlexW2504075081

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.