Evidence map›Paper›PMID 27461219›Full record

SynthesisHuman genetics2016

Association of kidney structure-related gene variants with type 2 diabetes-attributed end-stage kidney disease in African Americans.

Meijian Guan, Jun Ma, Jacob M Keaton, Latchezar Dimitrov, Poorva Mudgal, Mary Stromberg, Jason A Bonomo, Pamela J Hicks, Barry I Freedman, Donald W Bowden and 1 more

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Human genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
  2. Article
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  7. Article
  8. Complexities of the glomerular basement membrane.Nature reviews. Nephrology · 2021
    Review
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  20. Linking Race, Cancer Outcomes, and Tissue Repair.The American journal of pathology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 2 countries.

Meijian GuanCenter for Genomics and Personalized Medicine Research, Medical Center Boulevard, Wake Forest School of Medicine, Winston-Salem, NC, 27157, USA.
Jun MaSection on Nephrology, Department of Internal Medicine, Wake Forest School of Medicine, Winston-Salem, NC, USA.
Jacob M KeatonCenter for Genomics and Personalized Medicine Research, Medical Center Boulevard, Wake Forest School of Medicine, Winston-Salem, NC, 27157, USA.
Latchezar DimitrovCenter for Genomics and Personalized Medicine Research, Medical Center Boulevard, Wake Forest School of Medicine, Winston-Salem, NC, 27157, USA.
Poorva MudgalCenter for Genomics and Personalized Medicine Research, Medical Center Boulevard, Wake Forest School of Medicine, Winston-Salem, NC, 27157, USA.
Mary StrombergCenter for Genomics and Personalized Medicine Research, Medical Center Boulevard, Wake Forest School of Medicine, Winston-Salem, NC, 27157, USA.
Jason A BonomoCenter for Genomics and Personalized Medicine Research, Medical Center Boulevard, Wake Forest School of Medicine, Winston-Salem, NC, 27157, USA.
Pamela J HicksCenter for Genomics and Personalized Medicine Research, Medical Center Boulevard, Wake Forest School of Medicine, Winston-Salem, NC, 27157, USA.
Barry I FreedmanSection on Nephrology, Department of Internal Medicine, Wake Forest School of Medicine, Winston-Salem, NC, USA.
Donald W BowdenCenter for Genomics and Personalized Medicine Research, Medical Center Boulevard, Wake Forest School of Medicine, Winston-Salem, NC, 27157, USA.
Maggie C Y NgCenter for Genomics and Personalized Medicine Research, Medical Center Boulevard, Wake Forest School of Medicine, Winston-Salem, NC, 27157, USA. mng@wakehealth.edu.
Wake Forest University · US

Funding

Genetics of African American Type 2 DiabetesR01DK066358 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI NG, MAGGIE · 2003 to 2019
$6.2M
MAPPING GENES FOR NIDDM NEPHROPATHY IN AFRICAN AMERICANSR01DK053591 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI BOWDEN, DONALD W · 1998 to 2015
$5.6M
Genetic Analysis of African American Hypertensive End-Stage Renal DiseaseR01DK070941 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI FREEDMAN, BARRY IRA · 2006 to 2015
$4.7M
Genetic Determinants of Adiposity in African AmericansR01DK087914 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI NG, MAGGIE · 2010 to 2014
$3.0M
Natural History of MYH9-Associated NephropathyR01DK084149 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI FREEDMAN, BARRY IRA · 2009 to 2012
$2.3M
NIDDK NIH HHS R01 DK053591NIDDK NIH HHS R01 DK066358NIDDK NIH HHS R01 DK070941NIDDK NIH HHS R01 DK084149NIDDK NIH HHS R01 DK087914
6 · The paper itself

Abstract

African Americans (AAs) are at higher risk for developing end-stage kidney disease (ESKD) compared to European Americans. Genome-wide association studies have identified variants associated with diabetic and non-diabetic kidney diseases. Nephropathy loci, including SLC7A9, UMOD, and SHROOM3, have been implicated in the maintenance of normal glomerular and renal tubular structure and function. Herein, 47 genes important in podocyte, glomerular basement membrane, mesangial cell, mesangial matrix, renal tubular cell, and renal interstitium structure were examined for association with type 2 diabetes (T2D)-attributed ESKD in AAs. Single-variant association analysis was performed in the discovery stage, including 2041 T2D-ESKD cases and 1140 controls (non-diabetic, non-nephropathy). Discrimination analyses in 667 T2D cases-lacking nephropathy excluded T2D-associated SNPs. Nominal associations were tested in an additional 483 T2D-ESKD cases and 554 controls in the replication stage. Meta-analysis of 4218 discovery and replication samples revealed three significant associations with T2D-ESKD at CD2AP and MMP2 (P

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyAdaptor Proteins, Signal TransducingAdultAgedCytoskeletal ProteinsDiabetes Mellitus, Type 2Diabetic NephropathiesFemaleGenotypeGlomerular Basement MembraneHaplotypesHumansKidney Failure, ChronicKidney Tubules, DistalMaleAdaptor Proteins, Signal TransducingCD2-associated proteinCytoskeletal ProteinsMatrix Metalloproteinase 2MMP2 protein, human

Identifiers

PMID27461219
PMCPMC5053912
OpenAlexW2486385895

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.