Evidence map›Paper›PMID 27460547›Full record

ArticleVirus research2016

Function of ubiquitin (Ub) specific protease 15 (USP15) in HIV-1 replication and viral protein degradation.

Dohun Pyeon, Khalid Amine Timani, Fahad Gulraiz, Johnny J He, In-Woo Park

Abstract read
In one paragraph

Article in Virus research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dohun PyeonDepartments of Immunology and Microbiology, and Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA.
Khalid Amine TimaniDepartment of Cell Biology and Immunology, University of North Texas Health Science Center, Fort Worth, TX 76107, USA.
Fahad GulraizDepartment of Cell Biology and Immunology, University of North Texas Health Science Center, Fort Worth, TX 76107, USA.
Johnny J HeDepartment of Cell Biology and Immunology, University of North Texas Health Science Center, Fort Worth, TX 76107, USA.
In-Woo ParkDepartment of Cell Biology and Immunology, University of North Texas Health Science Center, Fort Worth, TX 76107, USA. Electronic address: inwoo.park@unthsc.edu.

Funding

HIV Infection and Latency In AstrocytesR01DA043162 · NIDA · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI HE, JOHNNY J · 2016 to 2020
$2.8M
Role of HIV-1 Nef in Acceleration of HCV-Mediated Liver DiseaseR01DK099055 · NIDDK · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI PARK, IN-WOO · 2014 to 2017
$1.4M
NIDA NIH HHS R01 DA043162NIDDK NIH HHS R01 DK099055
6 · The paper itself

Abstract

HIV-1 Nef is necessary and may be sufficient for HIV-1-associated AIDS pathogenicity, in that knockout of Nef alone can protect HIV-infected patients from AIDS. We therefore investigated the feasibility of physical knockout of Nef, using the host ubiquitin proteasome system in HIV-1-infected cells. Our co-immunoprecipitation analysis demonstrated that Nef interacted with ubiquitin specific protease 15 (USP15), and that USP15, which is known to stabilize cellular proteins, degraded Nef. Nef could also cause decay of USP15, although Nef-mediated degradation of USP15 was weaker than USP15-mediated Nef degradation. Direct interaction between Nef and USP15 was essential for the observed reciprocal decay of the proteins. Further, USP15 degraded not only Nef but also HIV-1 structural protein, Gag, thereby substantially inhibiting HIV-1 replication. However, Gag did not degrade USP15, indicating that the Nef and USP15 complex, in distinction to other viral proteins, play an integral role in coordinating viral protein degradation and hence HIV-1 replication. Moreover, Nef and USP15 globally suppressed ubiquitylation of cellular proteins, indicating that these proteins are major determinants for the stability of cellular as well as viral proteins. Taken together, these data indicate that Nef and USP15 are vital in regulating degradation of viral and cellular proteins and thus HIV-1 replication, and specific degradation of viral, not cellular proteins, by USP15 points to USP15 as a candidate therapeutic agent to combat AIDS by eliminating viral proteins from the infected cells via USP15-mediated proteosomal degradation.

Indexed as

Virus ReplicationCell LineEndosomesHIV-1HIV InfectionsHumansIntracellular Spacenef Gene Products, Human Immunodeficiency VirusProteasome Endopeptidase ComplexProtein BindingProtein StabilityProtein TransportProteolysisUbiquitinationUbiquitin-Specific ProteasesViral Proteinsnef Gene Products, Human Immunodeficiency Virusnef protein, Human immunodeficiency virus 1Proteasome Endopeptidase ComplexUbiquitin-Specific ProteasesUSP15 protein, humanViral ProteinsHIV-1 NefUbiquitin proteasome system (UPS)UbiquitylationUSP15Viral protein degradation

Identifiers

PMID27460547
PMCPMC5012541

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.