Evidence map›Paper›PMID 27459848›Full record

ArticleBMC microbiology2016

Genotypic characterization of drug resistant Mycobacterium tuberculosis in Quebec, 2002-2012.

Joanna Spinato, Élyse Boivin, Émilie Bélanger-Trudelle, Huguette Fauchon, Cécile Tremblay, Hafid Soualhine

Abstract read
In one paragraph

Article in BMC microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Mutations inAntibiotics (Basel, Switzerland) · 2024
    Article
  4. Article
  5. Article
  6. Indigenous Transmission ofOpen forum infectious diseases · 2019
    Article
  7. Article
  8. Evaluation of Genotype MTBDRFrontiers in microbiology · 2018
    Article
  9. Pyrazinamide Susceptibility andAntimicrobial agents and chemotherapy · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Joanna SpinatoMcGill University, Montreal, Quebec, Canada.
Élyse BoivinLaboratoire de santé publique du Quebec, 20045 chemin Sainte-Marie, Sainte-Anne de Bellevue, Quebec, H9X 3R5, Canada.
Émilie Bélanger-TrudelleLaboratoire de santé publique du Quebec, 20045 chemin Sainte-Marie, Sainte-Anne de Bellevue, Quebec, H9X 3R5, Canada.
Huguette FauchonLaboratoire de santé publique du Quebec, 20045 chemin Sainte-Marie, Sainte-Anne de Bellevue, Quebec, H9X 3R5, Canada.
Cécile TremblayUniversité de Montreal, Montreal, Quebec, Canada.
Hafid SoualhineLaboratoire de santé publique du Quebec, 20045 chemin Sainte-Marie, Sainte-Anne de Bellevue, Quebec, H9X 3R5, Canada. hafid.soualhine@inspq.qc.ca.ORCID 0000-0002-5526-6741

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe increasing emergence of drug-resistant tuberculosis presents a threat to the effective control of tuberculosis (TB). Rapid detection of drug-resistance is more important than ever to address this scourge. The purpose of this study was to genotypically characterize the first-line antitubercular drug-resistant isolates collected over 11 years in Quebec.

resultsThe main mutations found in our resistant strains collection (n = 225) include: the S315T substitution in katG (50.2 %), the -15 C/T mutation in the inhA promoter (29 %); the S531L substitution in rpoB (43 %); the deletion 8 bp 446 / + R140S in pncA (72.9 %); the M306I (35.7 %) and M306V (21.4 %) substitutions in embB. Ten of the mutations in katG and 4 mutations identified in pncA were previously undescribed.

conclusionScreening of mutations conferring resistance to first-line antituberculous drugs using DNA-sequencing approach seems to be feasible and would drastically shorten the time to determine the resistance profile compared to the proportion method.

Indexed as

AmidohydrolasesAntitubercular AgentsBacterial ProteinsCatalaseDNA, BacterialDNA-Directed RNA PolymerasesGenome, BacterialGenotypeHumansMicrobial Sensitivity TestsMycobacterium tuberculosisOxidoreductasesPentosyltransferasesQuebecSequence Analysis, DNASequence DeletionAmidohydrolasesAntitubercular AgentsBacterial ProteinsCatalaseDNA, BacterialDNA-Directed RNA PolymerasesEmbB protein, Mycobacterium tuberculosisInhA protein, MycobacteriumkatG protein, Mycobacterium tuberculosisOxidoreductasesPentosyltransferasesPncA protein, Mycobacterium tuberculosisrpoB protein, Mycobacterium tuberculosisDrug-resistanceembBinhAkatGM. tuberculosispncArpoB

Identifiers

PMID27459848
PMCPMC4962473

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.