ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2016
Draft genome sequence of an inbred line of Chenopodium quinoa, an allotetraploid crop with great environmental adaptability and outstanding nutritional properties.
Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.
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Who cites it
56 citing papers in PubMed.
- Genomic prediction in quinoa across contrasting environments using statistical and machine learning models.The plant genome · 2026Article
- Quinoa as a naturally stress-resistant crop: current status and future promises.Stress biology · 2026Review
- A gene-based pangenome reveals genomic divergence and altitudinal differentiation in allotetraploid quinoa.Frontiers in plant science · 2026Article
- Genotype-by-Environment Interaction Stability Analysis of New Quinoa (Plants (Basel, Switzerland) · 2025Article
- Identification ofPlant biotechnology (Tokyo, Japan) · 2025Article
- CqHKT1 and CqSOS1 mediate genotype-dependent NaFrontiers in plant science · 2025Article
- Exploring the hidden treasure in arid regions: pseudocereals as sustainable, climate-resilient crops for food security.Frontiers in plant science · 2025Review
- Epidermal bladder cells play a role in water retention in quinoa leaves.Plant biotechnology (Tokyo, Japan) · 2024Article
- Genome assembly of a diversity panel of Chenopodium quinoa.Scientific data · 2024Article
- Integrating Physiology, Transcriptome, and Metabolome Analyses Reveals the Drought Response in Two Quinoa Cultivars with Contrasting Drought Tolerance.International journal of molecular sciences · 2024Article
- Quinoa: A Promising Crop for Resolving the Bottleneck of Cultivation in Soils Affected by Multiple Environmental Abiotic Stresses.Plants (Basel, Switzerland) · 2024Review
- Current trends and prospects in quinoa research: An approach for strategic knowledge areas.Food science & nutrition · 2024Review
- Chromosome-level genome assemblies for two quinoa inbred lines from northern and southern highlands of Altiplano where quinoa originated.Frontiers in plant science · 2024Article
- A chromosome-scale assembly of the quinoa genome provides insights into the structure and dynamics of its subgenomes.Communications biology · 2023Article
- Genome-wide identification and characterization of glutathione3 Biotech · 2023Article
- Shotgun proteomics of quinoa seeds reveals chitinases enrichment under rainfed conditions.Scientific reports · 2023Article
- Snapshot of four mature quinoa (Physiology and molecular biology of plants : an international journal of functional plant biology · 2023Article
- Genetic resources and breeding approaches for improvement of amaranth (Frontiers in nutrition · 2023Review
- Genome-wide identification and expression analysis of the SPL transcription factor family and its response to abiotic stress in Quinoa (Chenopodium quinoa).BMC genomics · 2022Article
- Genomic Variation Underlying the Breeding Selection of Quinoa Varieties Longli-4 and CA3-1 in China.International journal of molecular sciences · 2022Article
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Authors and funding
16 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Chenopodium quinoa Willd. (quinoa) originated from the Andean region of South America, and is a pseudocereal crop of the Amaranthaceae family. Quinoa is emerging as an important crop with the potential to contribute to food security worldwide and is considered to be an optimal food source for astronauts, due to its outstanding nutritional profile and ability to tolerate stressful environments. Furthermore, plant pathologists use quinoa as a representative diagnostic host to identify virus species. However, molecular analysis of quinoa is limited by its genetic heterogeneity due to outcrossing and its genome complexity derived from allotetraploidy. To overcome these obstacles, we established the inbred and standard quinoa accession Kd that enables rigorous molecular analysis, and presented the draft genome sequence of Kd, using an optimized combination of high-throughput next generation sequencing on the Illumina Hiseq 2500 and PacBio RS II sequencers. The de novo genome assembly contained 25 k scaffolds consisting of 1 Gbp with N50 length of 86 kbp. Based on these data, we constructed the free-access Quinoa Genome DataBase (QGDB). Thus, these findings provide insights into the mechanisms underlying agronomically important traits of quinoa and the effect of allotetraploidy on genome evolution.
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