Evidence map›Paper›PMID 27458475›Full record

ArticleFrontiers in plant science2016

An Integrated Biochemical, Proteomics, and Metabolomics Approach for Supporting Medicinal Value of Panax ginseng Fruits.

So W Kim, Ravi Gupta, Seo H Lee, Cheol W Min, Ganesh K Agrawal, Randeep Rakwal, Jong B Kim, Ick H Jo, Soo-Yun Park, Jae K Kim and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Plant stress and proteomics in medicinal plants.Frontiers in plant science · 2025
    Review
  3. Review
  4. The dehiscence process inJournal of ginseng research · 2022
    Article
  5. Review
  6. Article
  7. Article
  8. Label-free quantitative proteomic analysis ofJournal of ginseng research · 2019
    Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

So W KimDepartment of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang South Korea.
Ravi GuptaDepartment of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang South Korea.
Seo H LeeDepartment of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang South Korea.
Cheol W MinDepartment of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang South Korea.
Ganesh K AgrawalResearch Laboratory for Biotechnology and Biochemistry, KathmanduNepal; Global Research Arch for Developing Education Academy Private Limited, BirgunjNepal.
Randeep RakwalResearch Laboratory for Biotechnology and Biochemistry, KathmanduNepal; Global Research Arch for Developing Education Academy Private Limited, BirgunjNepal; Faculty of Health and Sport Sciences and Tsukuba International Academy for Sport Studies, University of Tsukuba, IbarakiJapan; Global Research Center for Innovative Life Science, Peptide Drug Innovation, School of Pharmacy and Pharmaceutical Sciences, Hoshi University, TokyoJapan.
Jong B KimDepartment of Biotechnology, College of Biomedical and Health Sciences, Konkuk University, Choong-Ju South Korea.
Ick H JoDepartment of Herbal Crop Research, Rural Development Administration, Eumseong South Korea.
Soo-Yun ParkNational Academy of Agricultural Science, Rural Development Administration, Jeollabuk-do South Korea.
Jae K KimDivision of Life Sciences, Incheon National University, Incheon South Korea.
Young-Chang KimDepartment of Herbal Crop Research, Rural Development Administration, Eumseong South Korea.
Kyong H BangDepartment of Herbal Crop Research, Rural Development Administration, Eumseong South Korea.
Sun T KimDepartment of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang South Korea.
Pusan National University · KRIncheon National University · KRRural Development Administration · KRKonkuk University · KRUniversity of Tsukuba · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Panax ginseng roots are well known for their medicinal properties and have been used in Korean and Chinese traditional medicines for 1000s of years. However, the medicinal value of P. ginseng fruits remain poorly characterized. In this study, we used an integrated biochemical, proteomics, and metabolomics approach to look into the medicinal properties of ginseng fruits. DPPH (1,1-diphenyl-2-picrylhydrazyl) and ABTS [2,2'-azino-bis (3-ethylbenzothiazoline-6-sulphonic acid)] assays showed higher antioxidant activities in ginseng fruits than leaves or roots. Two-dimensional gel electrophoresis (2-DE) profiling of ginseng fruit proteins (cv. Cheongsun) showed more than 400 spots wherein a total of 81 protein spots were identified by mass spectrometry using NCBInr, UniRef, and an in-house developed RNAseq (59,251 protein sequences)-based databases. Gene ontology analysis showed that most of the identified proteins were related to the hydrolase (18%), oxidoreductase (16%), and ATP binding (15%) activities. Further, a comparative proteome analysis of four cultivars of ginseng fruits (cvs. Yunpoong, Gumpoong, Chunpoong, and Cheongsun) led to the identification of 22 differentially modulated protein spots. Using gas chromatography-time of flight mass spectrometry (GC-TOF MS), 66 metabolites including amino acids, sugars, organic acids, phenolic acids, phytosterols, tocopherols, and policosanols were identified and quantified. Some of these are well known medicinal compounds and were not previously identified in ginseng. Interestingly, the concentration of almost all metabolites was higher in the Chunpoong and Gumpoong cultivars. Parallel comparison of the four cultivars also revealed higher amounts of the medicinal metabolites in Chunpoong and Gumpoong cultivars. Taken together, our results demonstrate that ginseng fruits are a rich source of medicinal compounds with potential beneficial health effects.

Indexed as

2D reference mapantioxidantsfruitsginsengmetabolomeproteome

Identifiers

PMID27458475
PMCPMC4930952
OpenAlexW2474858272

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.