Evidence map›Paper›PMID 27458467›Full record

ArticleFrontiers in plant science2016

Genetic Linkage Map Construction and QTL Analysis of Two Interspecific Reproductive Isolation Traits in Sponge Gourd.

Haibin Wu, Xiaoli He, Hao Gong, Shaobo Luo, Mingzhu Li, Junqiu Chen, Changyuan Zhang, Ting Yu, Wangping Huang, Jianning Luo

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 34 citations in OpenAlex.

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  5. Identification of suitable reference genes for quantitative reverse transcription PCR inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2022
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  9. A mutation in LacDWARF1 results in a GA-deficient dwarf phenotype in sponge gourd (Luffa acutangula).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  10. Article
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  12. A high-quality sponge gourd (Horticulture research · 2020
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Haibin WuVegetable Research Institute, Guangdong Academy of Agricultural ScienceGuangzhou, China; Guangdong Provincial Key Lab for New Technology Research on VegetablesGuangzhou, China.
Xiaoli HeVegetable Research Institute, Guangdong Academy of Agricultural Science Guangzhou, China.
Hao GongVegetable Research Institute, Guangdong Academy of Agricultural Science Guangzhou, China.
Shaobo LuoVegetable Research Institute, Guangdong Academy of Agricultural ScienceGuangzhou, China; Guangdong Provincial Key Lab for New Technology Research on VegetablesGuangzhou, China.
Mingzhu LiVegetable Research Institute, Guangdong Academy of Agricultural Science Guangzhou, China.
Junqiu ChenVegetable Research Institute, Guangdong Academy of Agricultural Science Guangzhou, China.
Changyuan ZhangVegetable Research Institute, Guangdong Academy of Agricultural Science Guangzhou, China.
Ting YuAgro-biological Gene Research Center, Guangdong Academy of Agricultural Sciences Guangzhou, China.
Wangping HuangVegetable Research Institute, Guangdong Academy of Agricultural Science Guangzhou, China.
Jianning LuoVegetable Research Institute, Guangdong Academy of Agricultural Science Guangzhou, China.
Guangdong Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The hybrids between Luffa acutangula (L.) Roxb. and L.cylindrica (L.) Roem. have strong heterosis effects. However, some reproductive isolation traits hindered their normal hybridization and fructification, which was mainly caused by the flowering time and hybrid pollen sterility. In order to study the genetic basis of two interspecific reproductive isolation traits, we constructed a genetic linkage map using an F2 population derived from a cross between S1174 [L. acutangula (L.) Roxb.] and 93075 [L. cylindrica (L.) Roem.]. The map spans 1436.12 CentiMorgans (cM), with an average of 8.11 cM among markers, and consists of 177 EST-SSR markers distributed in 14 linkage groups (LG) with an average of 102.58 cM per LG. Meanwhile, we conducted colinearity analysis between the sequences of EST-SSR markers and the genomic sequences of cucumber, melon and watermelon. On the basis of genetic linkage map, we conducted QTL mapping of two reproductive isolation traits in sponge gourd, which were the flowering time and hybrid male sterility. Two putative QTLs associated with flowering time (FT) were both detected on LG 1. The accumulated contribution of these two QTLs explained 38.07% of the total phenotypic variance (PV), and each QTL explained 15.36 and 22.71% of the PV respectively. Four QTLs for pollen fertility (PF) were identified on LG 1 (qPF1.1 and qPF1.2), LG 3 (qPF3) and LG 7 (qPF7), respectively. The percentage of PF explained by these QTLs varied from 2.91 to 16.79%, and all together the four QTLs accounted for 39.98% of the total PV. Our newly developed EST-SSR markers and linkage map are very useful for gene mapping, comparative genomics and molecular marker-assisted breeding. These QTLs for interspecific reproductive isolation will also contribute to the cloning of genes relating to interspecific reproductive isolation and the utilization of interspecific heterosis in sponge gourd in further studies.

Indexed as

EST-SSR markerflowering timegenetic linkage mappollen fertilityQTL mappingsponge gourd

Identifiers

PMID27458467
PMCPMC4935800
OpenAlexW2463370329

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.