Evidence map›Paper›PMID 27458219›Full record

ArticleAntimicrobial agents and chemotherapy2016

Divergent Transcriptional Responses to Physiological and Xenobiotic Stress in Giardia duodenalis.

Brendan R E Ansell, Malcolm J McConville, Louise Baker, Pasi K Korhonen, Samantha J Emery, Staffan G Svärd, Robin B Gasser, Aaron R Jex

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Genetic Diversity of the Flavohemoprotein Gene ofInfection and drug resistance · 2020
    Article
  3. Review
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Brendan R E AnsellFaculty of Veterinary and Agricultural Sciences, University of Melbourne, Melbourne, Victoria, Australia bransell@unimelb.edu.au.ORCID 0000-0003-0297-897X
Malcolm J McConvilleBio21 Molecular Science and Biotechnology Institute, University of Melbourne, Melbourne, Victoria, Australia.
Louise BakerFaculty of Veterinary and Agricultural Sciences, University of Melbourne, Melbourne, Victoria, Australia Population Health and Immunity, Walter and Eliza Hall Institute of Medical Research, Melbourne, Victoria, Australia.
Pasi K KorhonenFaculty of Veterinary and Agricultural Sciences, University of Melbourne, Melbourne, Victoria, Australia.
Samantha J EmeryPopulation Health and Immunity, Walter and Eliza Hall Institute of Medical Research, Melbourne, Victoria, Australia.
Staffan G SvärdDepartment of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden.
Robin B GasserFaculty of Veterinary and Agricultural Sciences, University of Melbourne, Melbourne, Victoria, Australia.
Aaron R JexFaculty of Veterinary and Agricultural Sciences, University of Melbourne, Melbourne, Victoria, Australia Population Health and Immunity, Walter and Eliza Hall Institute of Medical Research, Melbourne, Victoria, Australia.
The University of Melbourne · AUUppsala University · SEWalter and Eliza Hall Institute of Medical Research · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding how parasites respond to stress can help to identify essential biological processes. Giardia duodenalis is a parasitic protist that infects the human gastrointestinal tract and causes 200 to 300 million cases of diarrhea annually. Metronidazole, a major antigiardial drug, is thought to cause oxidative damage within the infective trophozoite form. However, treatment efficacy is suboptimal, due partly to metronidazole-resistant infections. To elucidate conserved and stress-specific responses, we calibrated sublethal metronidazole, hydrogen peroxide, and thermal stresses to exert approximately equal pressure on trophozoite growth and compared transcriptional responses after 24 h of exposure. We identified 252 genes that were differentially transcribed in response to all three stressors, including glycolytic and DNA repair enzymes, a mitogen-activated protein (MAP) kinase, high-cysteine membrane proteins, flavin adenine dinucleotide (FAD) synthetase, and histone modification enzymes. Transcriptional responses appeared to diverge according to physiological or xenobiotic stress. Downregulation of the antioxidant system and α-giardins was observed only under metronidazole-induced stress, whereas upregulation of GARP-like transcription factors and their subordinate genes was observed in response to hydrogen peroxide and thermal stressors. Limited evidence was found in support of stress-specific response elements upstream of differentially transcribed genes; however, antisense derepression and differential regulation of RNA interference machinery suggest multiple epigenetic mechanisms of transcriptional control.

Indexed as

Transcription, GeneticAntiprotozoal AgentsCytoskeletal ProteinsDNA Repair EnzymesEpigenesis, GeneticGene Expression ProfilingGene Expression RegulationGiardia lambliaGlycolysisHistone CodeHot TemperatureHydrogen PeroxideMembrane ProteinsMetronidazoleMitogen-Activated Protein KinasesModels, MolecularAntiprotozoal AgentsCytoskeletal ProteinsDNA Repair EnzymesFMN adenylyltransferaseGARP protein, Trypanosomagiardin protein, Giardia lambliaHydrogen PeroxideMembrane ProteinsMetronidazoleMitogen-Activated Protein KinasesNucleotidyltransferasesProtozoan Proteins

Identifiers

PMID27458219
PMCPMC5038253
OpenAlexW2491624021

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.