Evidence map›Paper›PMID 27458134›Full record

ArticleThe Journal of cell biology2016

Deciphering dynamics of clathrin-mediated endocytosis in a living organism.

Joshua P Ferguson, Nathan M Willy, Spencer P Heidotting, Scott D Huber, Matthew J Webber, Comert Kural

Abstract read
In one paragraph

Article in The Journal of cell biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Vesiculation pathways in clathrin-mediated endocytosis.bioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Load adaptation by endocytic actin networks.Molecular biology of the cell · 2022
    Article
  13. Article
  14. Article
  15. Review
  16. CALM supports clathrin-coated vesicle completion upon membrane tension increase.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Joshua P FergusonDepartment of Physics, The Ohio State University, Columbus, OH 43210.ORCID 0000-0002-7990-6387
Nathan M WillyDepartment of Physics, The Ohio State University, Columbus, OH 43210.ORCID 0000-0002-6090-1148
Spencer P HeidottingDepartment of Physics, The Ohio State University, Columbus, OH 43210.
Scott D HuberDepartment of Physics, The Ohio State University, Columbus, OH 43210.
Matthew J WebberBiophysics Graduate Program, The Ohio State University, Columbus, OH 43210.ORCID 0000-0003-1092-4410
Comert KuralDepartment of Physics, The Ohio State University, Columbus, OH 43210 Biophysics Graduate Program, The Ohio State University, Columbus, OH 43210 kural.1@osu.edu.ORCID 0000-0002-9065-6542

Funding

Infectious Entry Mechanisms of Obligatory Intracellular PathogenR01AI121124 · NIAID · OHIO STATE UNIVERSITY · PI RIKIHISA, YASUKO · 2016 to 2020
$1.9M
NIAID NIH HHS R01 AI121124
6 · The paper itself

Abstract

Current understanding of clathrin-mediated endocytosis (CME) dynamics is based on detection and tracking of fluorescently tagged clathrin coat components within cultured cells. Because of technical limitations inherent to detection and tracking of single fluorescent particles, CME dynamics is not characterized in vivo, so the effects of mechanical cues generated during development of multicellular organisms on formation and dissolution of clathrin-coated structures (CCSs) have not been directly observed. Here, we use growth rates of fluorescence signals obtained from short CCS intensity trace fragments to assess CME dynamics. This methodology does not rely on determining the complete lifespan of individual endocytic assemblies. Therefore, it allows for real-time monitoring of spatiotemporal changes in CME dynamics and is less prone to errors associated with particle detection and tracking. We validate the applicability of this approach to in vivo systems by demonstrating the reduction of CME dynamics during dorsal closure of Drosophila melanogaster embryos.

Indexed as

EndocytosisAnimalsCell AdhesionCell NucleusCell SurvivalCell TrackingCholesterolClathrinClathrin-Coated VesiclesDrosophila melanogasterEmbryo, NonmammalianGenes, ReporterGreen Fluorescent ProteinsImaging, Three-DimensionalTime FactorsCholesterolClathrinGreen Fluorescent Proteins

Identifiers

PMID27458134
PMCPMC4970330

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.