Evidence map›Paper›PMID 27458021›Full record

ArticleThe Journal of biological chemistry2016

The Roles of Puf6 and Loc1 in 60S Biogenesis Are Interdependent, and Both Are Required for Efficient Accommodation of Rpl43.

Yi-Ting Yang, Ya-Han Ting, Kei-Jen Liang, Kai-Yin Lo

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Ribosome Assembly and Repair.Annual review of cell and developmental biology · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Puf6 and Loc1 Are the Dedicated Chaperones of Ribosomal Protein Rpl43 inInternational journal of molecular sciences · 2019
    Article
  12. Article
  13. Article
  14. Reduced Expression ofThe Plant cell · 2018
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yi-Ting YangFrom the Department of Agricultural Chemistry, National Taiwan University, Taipei 10617, Taiwan.
Ya-Han TingFrom the Department of Agricultural Chemistry, National Taiwan University, Taipei 10617, Taiwan.
Kei-Jen LiangFrom the Department of Agricultural Chemistry, National Taiwan University, Taipei 10617, Taiwan.
Kai-Yin LoFrom the Department of Agricultural Chemistry, National Taiwan University, Taipei 10617, Taiwan kaiyin@ntu.edu.tw.ORCID 0000-0003-0440-6836
National Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Puf6 and Loc1 have two important functional roles in the cells, asymmetric mRNA distribution and ribosome biogenesis. Puf6 and Loc1 are localized predominantly in the nucleolus. They bind ASH1 mRNA, repress its translation, and facilitate the transport to the daughter cells. Asymmetric mRNA distribution is important for cell differentiation. Besides their roles in mRNA localization, Puf6 and Loc1 have been shown to be involved in 60S biogenesis. In puf6Δ or loc1Δ cells, pre-rRNA processing and 60S export are impaired and 60S subunits are underaccumulated. The functional studies of Puf6 and Loc1 have been focused on ASH1 mRNA pathway, but their roles in 60S biogenesis are still not clear. In this study, we found that Puf6 and Loc1 interact directly with each other and both proteins interact with the ribosomal protein Rpl43 (L43e). Notably, the roles of Puf6 and Loc1 in 60S biogenesis are interdependent, and both are required for efficient accommodation of Rpl43. Loc1 is further required to maintain the protein level of Rpl43. Additionally, the recruitment of Rpl43 is required for the release of Puf6 and Loc1. We propose that Puf6 and Loc1 facilitate Rpl43 loading and are sequentially released from 60S after incorporation of Rpl43 into ribosomes in yeast.

Indexed as

Nuclear ProteinsRibosomal ProteinsRibosome Subunits, Large, EukaryoticRNA-Binding ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsLOC1 protein, S cerevisiaeNuclear ProteinsPuf6 protein, S cerevisiaeRibosomal ProteinsRNA-Binding ProteinsRPL43a protein, S cerevisiaeSaccharomyces cerevisiae Proteinsasymmetric mRNA distributionchaperonemRNAprecursor ribosomal RNA (pre-rRNA)ribosomal proteinribosomeribosome assembly

Identifiers

PMID27458021
PMCPMC5016672
OpenAlexW2476638614

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.