Evidence map›Paper›PMID 27457619›Full record

ArticleMolecular and cellular biology2016

Id3 Orchestrates Germinal Center B Cell Development.

Shuwen Chen, Masaki Miyazaki, Vivek Chandra, Kathleen M Fisch, Aaron N Chang, Cornelis Murre

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Shuwen ChenDepartment of Molecular Biology, University of California, San Diego, La Jolla, California, USA.
Masaki MiyazakiDepartment of Molecular Biology, University of California, San Diego, La Jolla, California, USA.
Vivek ChandraDepartment of Molecular Biology, University of California, San Diego, La Jolla, California, USA.
Kathleen M FischDepartment of Molecular Biology and Bioinformatics and Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Aaron N ChangDepartment of Molecular Biology and Bioinformatics and Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Cornelis MurreDepartment of Molecular Biology, University of California, San Diego, La Jolla, California, USA murre@biomail.ucsd.edu.
University of California, San Diego · US

Funding

VIRAL MALIGNANCYP30CA023100 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DIANE M SIMEONE · 1985 to 2026
$124.9M
UC San Diego Clinical and Translational Research InstituteUL1TR001442 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FIRESTEIN, GARY S, HOGARTH, MICHAEL · 2015 to 2024
$88.3M
The role of TCR, ligand, and signal strength in human γδ T cell developmentP01AI102853 · NIAID · RESEARCH INST OF FOX CHASE CAN CTR · PI CORNELIS MURRE · 2014 to 2026
$26.3M
The 3D-Structures of the Pre-Pro-B and Pro-B Cell GenomesR01AI100880 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MURRE, CORNELIS · 2012 to 2022
$4.1M
Recognition Of The Dendritic Cell Surface Receptor Dc-sign By HIV Gp120Z01AI000880 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI SUN, PETER D. · 2001 to 2008
$959k
Intramural NIH HHS Z01 AI000880NCATS NIH HHS UL1 TR001442NCI NIH HHS P30 CA023100NIAID NIH HHS P01 AI102853NIAID NIH HHS R01 AI100880
6 · The paper itself

Abstract

Previous studies have demonstrated that E proteins induce activation-induced deaminase (AID) expression in activated B cells. Here, we examined the role of Id3 in germinal center (GC) cells. We found that Id3 expression is high in follicular B lineage cells but declines in GC cells. Immunized mice with Id3 expression depleted displayed a block in germinal center B cell maturation, showed reduced numbers of marginal zone B cells and class-switched cells, and were associated with decreased antibody titers and lower numbers of plasma cells. In vitro, Id3-depleted B cells displayed a defect in class switch recombination. Whereas AID levels were not altered in Id3-depleted activated B cells, the expression of a subset of genes encoding signaling components of antigen receptor-, cytokine receptor-, and chemokine receptor-mediated signaling was significantly impaired. We propose that during the GC reaction, Id3 levels decline to activate the expression of genes encoding signaling components that mediate B cell receptor- and or cytokine receptor-mediated signaling to promote the differentiation of GC B cells.

Indexed as

AICDA (Activation-Induced Cytidine Deaminase)AnimalsB-LymphocytesCell DifferentiationCells, CulturedCytidine DeaminaseGene Expression RegulationGene Knockdown TechniquesGerminal CenterImmunizationImmunoglobulin Class SwitchingInhibitor of Differentiation ProteinsLymphocyte ActivationMiceSignal TransductionAICDA (Activation-Induced Cytidine Deaminase)Cytidine DeaminaseIdb3 protein, mouseInhibitor of Differentiation Proteins

Identifiers

PMID27457619
PMCPMC5038142
OpenAlexW2488381803

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.