Evidence map›Paper›PMID 27456538›Full record

ArticleNeuroImage2016

Sheet Probability Index (SPI): Characterizing the geometrical organization of the white matter with diffusion MRI.

Chantal M W Tax, Tom Dela Haije, Andrea Fuster, Carl-Fredrik Westin, Max A Viergever, Luc Florack, Alexander Leemans

Abstract read
In one paragraph

Article in NeuroImage, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chantal M W TaxDepartment of Radiology, Image Sciences Institute, University Medical Center Utrecht, Utrecht, Netherlands; Brigham and Women's Hospital, Harvard Medical School, Boston, MA, United States. Electronic address: chantal@isi.uu.nl.
Tom Dela HaijeMathematics and Computer Science, Eindhoven University of Technology, Eindhoven, Netherlands.
Andrea FusterMathematics and Computer Science, Eindhoven University of Technology, Eindhoven, Netherlands.
Carl-Fredrik WestinBrigham and Women's Hospital, Harvard Medical School, Boston, MA, United States.
Max A ViergeverDepartment of Radiology, Image Sciences Institute, University Medical Center Utrecht, Utrecht, Netherlands.
Luc FlorackMathematics and Computer Science, Eindhoven University of Technology, Eindhoven, Netherlands.
Alexander LeemansDepartment of Radiology, Image Sciences Institute, University Medical Center Utrecht, Utrecht, Netherlands.

Funding

Mapping the Human Connectome: Structure, Function, and HeritabilityU54MH091657 · NIMH · WASHINGTON UNIVERSITY · PI UGURBIL, KAMIL, VAN ESSEN, DAVID C · 2010 to 2014
$34.7M
Training and DisseminationP41EB015902 · NIBIB · BRIGHAM AND WOMEN'S HOSPITAL · PI PUJOL, SONIA · 2012 to 2022
$20.9M
Image Guided Therapy Center - Ultrasound-based sensor system for the monitoring of COVID-19 patientsP41EB015898 · NIBIB · BRIGHAM AND WOMEN'S HOSPITAL · PI TEMPANY, CLARE M · 2012 to 2021
$18.9M
Novel DT-MRI Analyses of White Matter in SchizophreniaR01MH074794 · NIMH · BRIGHAM AND WOMEN'S HOSPITAL · PI WESTIN, CARL-FREDRIK · 2007 to 2021
$9.6M
Novel computational methods for higher order diffusion MRI in autismR01MH092862 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI VERMA, RAGINI, WESTIN, CARL-FREDRIK · 2010 to 2014
$3.3M
NIBIB NIH HHS P41 EB015898NIBIB NIH HHS P41 EB015902NIMH NIH HHS R01 MH074794NIMH NIH HHS R01 MH092862NIMH NIH HHS U54 MH091657
6 · The paper itself

Abstract

The question whether our brain pathways adhere to a geometric grid structure has been a popular topic of debate in the diffusion imaging and neuroscience societies. Wedeen et al. (2012a, b) proposed that the brain's white matter is organized like parallel sheets of interwoven pathways. Catani et al. (2012) concluded that this grid pattern is most likely an artifact, resulting from methodological biases that cause the tractography pathways to cross in orthogonal angles. To date, ambiguities in the mathematical conditions for a sheet structure to exist (e.g. its relation to orthogonal angles) combined with the lack of extensive quantitative evidence have prevented wide acceptance of the hypothesis. In this work, we formalize the relevant terminology and recapitulate the condition for a sheet structure to exist. Note that this condition is not related to the presence or absence of orthogonal crossing fibers, and that sheet structure is defined formally as a surface formed by two sets of interwoven pathways intersecting at arbitrary angles within the surface. To quantify the existence of sheet structure, we present a novel framework to compute the sheet probability index (SPI), which reflects the presence of sheet structure in discrete orientation data (e.g. fiber peaks derived from diffusion MRI). With simulation experiments we investigate the effect of spatial resolution, curvature of the fiber pathways, and measurement noise on the ability to detect sheet structure. In real diffusion MRI data experiments we can identify various regions where the data supports sheet structure (high SPI values), but also areas where the data does not support sheet structure (low SPI values) or where no reliable conclusion can be drawn. Several areas with high SPI values were found to be consistent across subjects, across multiple data sets obtained with different scanners, resolutions, and degrees of diffusion weighting, and across various modeling techniques. Under the strong assumption that the diffusion MRI peaks reflect true axons, our results would therefore indicate that pathways do not form sheet structures at every crossing fiber region but instead at well-defined locations in the brain. With this framework, sheet structure location, extent, and orientation could potentially serve as new structural features of brain tissue. The proposed method can be extended to quantify sheet structure in directional data obtained with techniques other than diffusion MRI, which is essential for further validation.

Indexed as

Models, TheoreticalDiffusion Magnetic Resonance ImagingHumansNeuroimagingWhite Matter

Identifiers

PMID27456538
PMCPMC5400114

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.