Evidence map›Paper›PMID 27456302›Full record

ArticleScientific reports2016

Aberrant DNA methylation reprogramming in bovine SCNT preimplantation embryos.

Sheng Zhang, Xin Chen, Fang Wang, Xinglan An, Bo Tang, Xueming Zhang, Liguang Sun, Ziyi Li

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 87 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Sheng ZhangState &Local Joint Engineering Laboratory for Animal Models of Human Diseases, Academy of Translational Medicine, First Hospital, Jilin University, Changchun, Jilin 130061, China.
Xin ChenAir Force General Hospital of PLA, Beijing 100037, China.
Fang WangCollege of Animal Science and Veterinary Medicine, Jilin University, Changchun, Jilin 130062, China.
Xinglan AnCollege of Animal Science and Veterinary Medicine, Jilin University, Changchun, Jilin 130062, China.
Bo TangCollege of Animal Science and Veterinary Medicine, Jilin University, Changchun, Jilin 130062, China.
Xueming ZhangCollege of Animal Science and Veterinary Medicine, Jilin University, Changchun, Jilin 130062, China.
Liguang SunState &Local Joint Engineering Laboratory for Animal Models of Human Diseases, Academy of Translational Medicine, First Hospital, Jilin University, Changchun, Jilin 130061, China.
Ziyi LiState &Local Joint Engineering Laboratory for Animal Models of Human Diseases, Academy of Translational Medicine, First Hospital, Jilin University, Changchun, Jilin 130061, China.
Jilin University · CNAir Force General Hospital PLA · CNFirst Hospital of Jilin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA methylation reprogramming plays important roles in mammalian embryogenesis. Mammalian somatic cell nuclear transfer (SCNT) embryos with reprogramming defects fail to develop. Thus, we compared DNA methylation reprogramming in preimplantation embryos from bovine SCNT and in vitro fertilization (IVF) and analyzed the influence of vitamin C (VC) on the reprogramming of DNA methylation. The results showed that global DNA methylation followed a typical pattern of demethylation and remethylation in IVF preimplantation embryos; however, the global genome remained hypermethylated in SCNT preimplantation embryos. Compared with the IVF group, locus DNA methylation reprogramming showed three patterns in the SCNT group. First, some pluripotency genes (POU5F1 and NANOG) and repeated elements (satellite I and α-satellite) showed insufficient demethylation and hypermethylation in the SCNT group. Second, a differentially methylated region (DMR) of an imprint control region (ICR) in H19 exhibited excessive demethylation and hypomethylation. Third, some pluripotency genes (CDX2 and SOX2) were hypomethylated in both the IVF and SCNT groups. Additionally, VC improved the DNA methylation reprogramming of satellite I, α-satellite and H19 but not that of POU5F1 and NANOG in SCNT preimplantation embryos. These results indicate that DNA methylation reprogramming was aberrant and that VC influenced DNA methylation reprogramming in SCNT embryos in a locus-specific manner.

Indexed as

Cellular ReprogrammingDNA MethylationAnimalsAscorbic AcidBlastocystCattleCDX2 Transcription FactorFemaleFertilization in VitroMaleNanog Homeobox ProteinNuclear Transfer TechniquesOctamer Transcription Factor-3SOXB1 Transcription FactorsVitaminsAscorbic AcidCDX2 Transcription FactorNanog Homeobox ProteinOctamer Transcription Factor-3SOXB1 Transcription FactorsVitamins

Identifiers

PMID27456302
PMCPMC4960566
OpenAlexW2480178585

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.