Evidence map›Paper›PMID 27456029›Full record

ArticleBiochemistry2016

Total Cellular RNA Modulates Protein Activity.

Subhabrata Majumder, Christopher M DeMott, Sergey Reverdatto, David S Burz, Alexander Shekhtman

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. RNA Structure: Past, Future, and Gene Therapy Applications.International journal of molecular sciences · 2024
    Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. In Situ Monitoring of Bacteria under Antimicrobial Stress UsingInternational journal of molecular sciences · 2019
    Article
  10. Applications of In-Cell NMR in Structural Biology and Drug Discovery.International journal of molecular sciences · 2019
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Subhabrata MajumderDepartment of Chemistry, State University of New York at Albany , 1400 Washington Avenue, Albany, New York 12222, United States.
Christopher M DeMottDepartment of Chemistry, State University of New York at Albany , 1400 Washington Avenue, Albany, New York 12222, United States.
Sergey ReverdattoDepartment of Chemistry, State University of New York at Albany , 1400 Washington Avenue, Albany, New York 12222, United States.
David S BurzDepartment of Chemistry, State University of New York at Albany , 1400 Washington Avenue, Albany, New York 12222, United States.
Alexander ShekhtmanDepartment of Chemistry, State University of New York at Albany , 1400 Washington Avenue, Albany, New York 12222, United States.
University at Albany, State University of New York · US

Funding

Real Time (RT) In-cell NMR technology to study protein interactions in live cellsR01GM085006 · NIGMS · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI SHEKHTMAN, ALEXANDER · 2010 to 2021
$2.4M
NIGMS NIH HHS R01 GM085006
6 · The paper itself

Abstract

RNA constitutes up to 20% of a cell's dry weight, corresponding to ∼20 mg/mL. This high concentration of RNA facilitates low-affinity protein-RNA quinary interactions, which may play an important role in facilitating and regulating biological processes. In the yeast Pichia pastoris, the level of ubiquitin-RNA colocalization increases when cells are grown in the presence of dextrose and methanol instead of methanol as the sole carbon source. Total RNA isolated from cells grown in methanol increases β-galactosidase activity relative to that seen with RNA isolated from cells grown in the presence of dextrose and methanol. Because the total cellular RNA content changes with growth medium, protein-RNA quinary interactions can alter in-cell protein biochemistry and may play an important role in cell adaptation, critical to many physiological and pathological states.

Indexed as

beta-GalactosidasePichiaRNA, Fungalbeta-GalactosidaseRNA, Fungal

Identifiers

PMID27456029
PMCPMC5645783
OpenAlexW2506406652

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.