Evidence map›Paper›PMID 27453919›Full record

ArticleTechnology2016

High-throughput evaluation of synthetic metabolic pathways.

Justin R Klesmith, Timothy A Whitehead

Abstract read
In one paragraph

Article in Technology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Trade-offs between enzyme fitness and solubility illuminated by deep mutational scanning.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Justin R KlesmithDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, USA.
Timothy A WhiteheadDepartment of Chemical Engineering and Materials Science, Michigan State University, East Lansing, MI 48824, USA; Department of Biosystems and Agricultural Engineering, Michigan State University, East Lansing, MI 48824, USA.

Funding

Deep Sequencing to Screen Functional Antibody EpitopesR21CA176854 · NCI · MICHIGAN STATE UNIVERSITY · PI CHAN, CHRISTINA, WHITEHEAD, TIMOTHY ANDREW · 2013 to 2014
$351k
NCI NIH HHS R21 CA176854
6 · The paper itself

Abstract

A central challenge in the field of metabolic engineering is the efficient identification of a metabolic pathway genotype that maximizes specific productivity over a robust range of process conditions. Here we review current methods for optimizing specific productivity of metabolic pathways in living cells. New tools for library generation, computational analysis of pathway sequence-flux space, and high-throughput screening and selection techniques are discussed.

Indexed as

Computational OptimizationDeep Mutational ScanningMetabolic EngineeringProtein EngineeringSynthetic Biology

Identifiers

PMID27453919
PMCPMC4955671

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.