Evidence map›Paper›PMID 27453069›Full record

ArticleAnimal genetics2016

GO-FAANG meeting: a Gathering On Functional Annotation of Animal Genomes.

Christopher K Tuggle, Elisabetta Giuffra, Stephen N White, Laura Clarke, Huaijun Zhou, Pablo J Ross, Hervé Acloque, James M Reecy, Alan Archibald, Rebecca R Bellone and 14 more

Abstract read
In one paragraph

Article in Animal genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Christopher K TuggleDepartment of Animal Science, Iowa State University, 806 Stange Road, Ames, IA, 50011, USA. cktuggle@iastate.edu.
Elisabetta GiuffraGABI, INRA, AgroParisTech, Université Paris-Saclay, 78350, Jouy-en-Josas, France. elisabetta.giuffra@jouy.inra.fr.
Stephen N WhiteUSDA-ARS Animal Disease Research Unit, Pullman, WA, 99164, USA.
Laura ClarkeEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.
Huaijun ZhouDepartment of Animal Science, University of California, Davis, CA, 95616, USA.
Pablo J RossDepartment of Animal Science, University of California, Davis, CA, 95616, USA.
Hervé AcloqueINRA, UMR1388 Génétique, Physiologie et Systèmes d'Elevage, F-31326, Castanet Tolosan, France.
James M ReecyDepartment of Animal Science, Iowa State University, 806 Stange Road, Ames, IA, 50011, USA.
Alan ArchibaldThe Roslin Institute and Royal(Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Edinburgh, EH29 9RG, UK.
Rebecca R BelloneDepartment of Population Health and Reproduction, Veterinary Genetics Laboratory, School of Veterinary Medicine, University of California-Davis, Davis, CA, USA.
Michèle BoichardGABI, INRA, AgroParisTech, Université Paris-Saclay, 78350, Jouy-en-Josas, France.
Amanda ChamberlainDepartment of Economic Development, Jobs, Transport and Resources, Agribiosciences Building, Bundoora, Australia.
Hans ChengAvian Disease and Oncology Laboratory, USDA, ARS, East Lansing, MI, 48823, USA.
Richard P M A CrooijmansAnimal Breeding and Genomics Centre, Wageningen University, PO Box 338, 6700, AH Wageningen, The Netherlands.
Mary E DelanyDepartment of Animal Science, University of California, Davis, CA, 95616, USA.
Carrie J FinnoDepartment of Population Health and Reproduction, University of California, Davis, CA, 95616, USA.
Martien A M GroenenAnimal Breeding and Genomics Centre, Wageningen University, PO Box 338, 6700, AH Wageningen, The Netherlands.
Ben HayesQueensland Alliance for Agriculture and Food Innovation, Centre for Animal Science, The University of Queensland, St. Lucia, 4072, Queensland, Australia.
Joan K LunneyAnimal Parasitic Diseases Laboratory, BARC, ARS, USDA, Beltsville, MD, 20705, USA.
Jessica L PetersenDepartment of Agricultural, Food, and Nutritional Science, University of Alberta, Edmonton, AB, Canada.
Graham S PlastowDepartment of Agricultural, Food, and Nutritional Science, University of Alberta, Edmonton, AB, Canada.
Carl J SchmidtDepartment of Animal and Food Sciences, University of Delaware, Newark, DE, 19716, USA.
Jiuzhou SongDepartment of Animal and Avian Sciences, University of Maryland, College Park, MD, 20742, USA.
Mick WatsonThe Roslin Institute and Royal(Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Edinburgh, EH29 9RG, UK.

Funding

Molecular pathogenesis of alpha-tocopherol associated neuroaxonal dystrophy in anK01OD015134 · OD · UNIVERSITY OF MINNESOTA · PI FINNO, CARRIE · 2013 to 2017
$599k
Biotechnology and Biological Sciences Research Council BBS/E/D/20211550Biotechnology and Biological Sciences Research Council BBS/E/D/20211551NCATS NIH HHS L40 TR001136NIH HHS K01 OD015134
6 · The paper itself

Abstract

The Functional Annotation of Animal Genomes (FAANG) Consortium recently held a Gathering On FAANG (GO-FAANG) Workshop in Washington, DC on October 7-8, 2015. This consortium is a grass-roots organization formed to advance the annotation of newly assembled genomes of domesticated and non-model organisms (www.faang.org). The workshop gathered together from around the world a group of 100+ genome scientists, administrators, representatives of funding agencies and commodity groups to discuss the latest advancements of the consortium, new perspectives, next steps and implementation plans. The workshop was streamed live and recorded, and all talks, along with speaker slide presentations, are available at www.faang.org. In this report, we describe the major activities and outcomes of this meeting. We also provide updates on ongoing efforts to implement discussions and decisions taken at GO-FAANG to guide future FAANG activities. In summary, reference datasets are being established under pilot projects; plans for tissue sets, morphological classification and methods of sample collection for different tissues were organized; and core assays and data and meta-data analysis standards were established.

Indexed as

GenomeGenomicsAnimalsAnimals, DomesticCongresses as TopicDistrict of ColumbiaInternational CooperationReference Standardsdata coordination centre (DCC)data sharingGenomicsmetanalysis

Identifiers

PMID27453069
PMCPMC5082551

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.