Evidence map›Paper›PMID 27452366›Full record

ArticleJournal of molecular biology2017

Canonical DNA Repair Pathways Influence R-Loop-Driven Genome Instability.

Peter C Stirling, Philip Hieter

Abstract read
In one paragraph

Article in Journal of molecular biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. RAD51-mediated R-loop formation acts to repair transcription-associated DNA breaks driving antigenic variation inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Article
  7. TDP-43 Epigenetic Facets and Their Neurodegenerative Implications.International journal of molecular sciences · 2023
    Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. R-Loop-Associated Genomic Instability and Implication of WRN and WRNIP1.International journal of molecular sciences · 2022
    Review
  14. Review
  15. Observational
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Peter C StirlingTerry Fox Laboratory, BC Cancer Agency, Vancouver, V5Z1L3, Canada; Department of Medical Genetics, University of British Columbia, Vancouver, V6H3N1, Canada. Electronic address: pstirling@bccrc.ca.
Philip HieterDepartment of Medical Genetics, University of British Columbia, Vancouver, V6H3N1, Canada; Michael Smith Laboratories, University of British Columbia, Vancouver, V6T1Z4, Canada. Electronic address: hieter@msl.ubc.ca.

Funding

Functional Determinants of Chromosome SegregationR01CA158162 · NCI · UNIVERSITY OF BRITISH COLUMBIA · PI HIETER, PHILIP A. · 2012 to 2016
$1.1M
NCI NIH HHS R01 CA158162
6 · The paper itself

Abstract

DNA repair defects create cancer predisposition in humans by fostering a higher rate of mutations. While DNA repair is quite well characterized, recent studies have identified previously unrecognized relationships between DNA repair and R-loop-mediated genome instability. R-loops are three-stranded nucleic acid structures in which RNA binds to genomic DNA to displace a loop of single-stranded DNA. Mutations in homologous recombination, nucleotide excision repair, crosslink repair, and DNA damage checkpoints have all now been linked to formation and function of transcription-coupled R-loops. This perspective will summarize recent literature linking DNA repair to R-loop-mediated genomic instability and discuss how R-loops may contribute to mutagenesis in DNA-repair-deficient cancers.

Indexed as

DNA RepairDNA ReplicationGenomic InstabilityDNA DamageDNA Repair EnzymesHumansNucleic Acid ConformationTranscription, GeneticDNA Repair EnzymesDNA repairFanconi AnemiaFork protectionGenome InstabilityR-loops

Identifiers

PMID27452366
PMCPMC5253333

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.