Evidence map›Paper›PMID 27452117›Full record

ArticleScientific reports2016

Lysine Acetylation and Succinylation in HeLa Cells and their Essential Roles in Response to UV-induced Stress.

Hong Xu, Xuanyi Chen, Xiaoli Xu, Rongyi Shi, Shasha Suo, Kaiying Cheng, Zhiguo Zheng, Meixia Wang, Liangyan Wang, Ye Zhao and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Impact of Lysine Succinylation on the Biology of Fungi.Current issues in molecular biology · 2024
    Review
  7. Review
  8. The emerging role of lysine succinylation in ovarian aging.Reproductive biology and endocrinology : RB&E · 2023
    Article
  9. Article
  10. Acetylome and Succinylome Profiling ofAntibiotics (Basel, Switzerland) · 2022
    Article
  11. Article
  12. Article
  13. Review
  14. Gold-Based Pharmacophore Inhibits Intracellular MYC Protein.Chemistry (Weinheim an der Bergstrasse, Germany) · 2021
    Article
  15. Article
  16. Review
  17. First Succinylome Profiling ofFrontiers in cellular and infection microbiology · 2020
    Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Hong XuInstitute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, 310029, China.
Xuanyi ChenInstitute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, 310029, China.
Xiaoli XuInstitute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, 310029, China.
Rongyi ShiInstitute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, 310029, China.
Shasha SuoInstitute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, 310029, China.
Kaiying ChengInstitute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, 310029, China.
Zhiguo ZhengInstitute of Zhejiang Cancer Research, Zhejiang Cancer Hospital, Hangzhou, 310022, China.
Meixia WangZhejiang Institute of Microbiology, Hangzhou, 310000, China.
Liangyan WangInstitute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, 310029, China.
Ye ZhaoInstitute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, 310029, China.
Bing TianInstitute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, 310029, China.
Yuejin HuaInstitute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, 310029, China.
Zhejiang University · CNInstitute of Microbiology · CNZhejiang Cancer Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lysine acetylation and succinylation are major types of protein acylation that are important in many cellular processes including gene transcription, cellular metabolism, DNA damage response. Malfunctions in these post-translational modifications are associated with genome instability and disease in higher organisms. In this study, we used high-resolution nano liquid chromatography-tandem mass spectrometry combined with affinity purification to quantify the dynamic changes of protein acetylation and succinylation in response to ultraviolet (UV)-induced cell stress. A total of 3345 acetylation sites in 1440 proteins and 567 succinylation sites in 246 proteins were identified, many of which have not been reported previously. Bioinformatics analysis revealed that these proteins are involved in many important biological processes, including cell signalling transduction, protein localization and cell metabolism. Crosstalk analysis between these two modifications indicated that modification switches might regulate protein function in response to UV-induced DNA damage. We further illustrated that FEN1 acetylation at different sites could lead to different cellular phenotypes, suggesting the multiple function involvement of FEN1 acetylation under DNA damage stress. These systematic analyses provided valuable resources and new insight into the potential role of lysine acetylation and succinylation under physiological and pathological conditions.

Indexed as

AcetylationCell Line, TumorDNA DamageGenomic InstabilityHeLa CellsHumansLysineProtein Processing, Post-TranslationalStress, PhysiologicalSuccinic AcidUltraviolet RaysLysineSuccinic Acid

Identifiers

PMID27452117
PMCPMC4959001
OpenAlexW2475683717

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.