Evidence map›Paper›PMID 27449227›Full record

ArticlePlant signaling & behavior2016

A network of genes associated with poplar root development in response to low nitrogen.

Madhumita Dash, Yordan S Yordanov, Tatyana Georgieva, Sapna Kumari, Hairong Wei, Victor Busov

Open access · bronzeAbstract read
In one paragraph

Article in Plant signaling & behavior, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Madhumita Dasha Forest Resources and Environmental Science, Michigan Technological University , Houghton , MI , USA.
Yordan S Yordanova Forest Resources and Environmental Science, Michigan Technological University , Houghton , MI , USA.
Tatyana Georgievaa Forest Resources and Environmental Science, Michigan Technological University , Houghton , MI , USA.
Sapna Kumaria Forest Resources and Environmental Science, Michigan Technological University , Houghton , MI , USA.
Hairong Weia Forest Resources and Environmental Science, Michigan Technological University , Houghton , MI , USA.
Victor Busova Forest Resources and Environmental Science, Michigan Technological University , Houghton , MI , USA.
Michigan Technological University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Deployment of the root system is highly sensitive to the levels and spatial distribution of nutrients like nitrogen. However, the genetic determinants of these sensing and deployment mechanisms are still poorly understood. Previously, using system approaches based on temporal changes in root transcriptome in relation to low nitrogen (LN), we have been able to identify a module that activates root production in poplar in response to LN conditions. Here, using comparative, gene ontology and expression analyses, we provide further evidence that the genes in this module are indeed involved in regulation of root development under LN. Better understanding of these modules will enable approaches for breeding for better nitrogen use efficiency through development of a more sensitive and plastic root system.

Indexed as

Gene Expression Regulation, PlantNitrogenPlant RootsPopulusTranscriptomeNitrogenGene networkhubslateral root growthnitrogen stressPopulus tremula x P. alba

Identifiers

PMID27449227
PMCPMC5022414
OpenAlexW2497357824

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.