Evidence map›Paper›PMID 27449056›Full record

ArticleGenetics2016

The Genetic Basis of Natural Variation in Caenorhabditis elegans Telomere Length.

Daniel E Cook, Stefan Zdraljevic, Robyn E Tanny, Beomseok Seo, David D Riccardi, Luke M Noble, Matthew V Rockman, Mark J Alkema, Christian Braendle, Jan E Kammenga and 5 more

Abstract read
In one paragraph

Article in Genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed.

  1. Article
  2. Article
  3. A gap-free, telomere-to-telomere genome assembly for thebioRxiv : the preprint server for biology · 2026
    Article
  4. Global genomic diversity of the selfing nematodebioRxiv : the preprint server for biology · 2026
    Article
  5. bioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Daniel E CookDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois 60208 Interdisciplinary Biological Science Program, Northwestern University, Evanston, Illinois 60208.ORCID 0000-0003-3347-562X
Stefan ZdraljevicDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois 60208 Interdisciplinary Biological Science Program, Northwestern University, Evanston, Illinois 60208.ORCID 0000-0003-2883-4616
Robyn E TannyDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois 60208.
Beomseok SeoDepartment of Biological Sciences, Institute of Molecular Biology and Genetics, Seoul National University, 08826, Korea.
David D RiccardiDepartment of Biology, New York University, New York 10003 Center for Genomics and Systems Biology, New York University, New York 10003.
Luke M NobleDepartment of Biology, New York University, New York 10003 Center for Genomics and Systems Biology, New York University, New York 10003.
Matthew V RockmanDepartment of Biology, New York University, New York 10003 Center for Genomics and Systems Biology, New York University, New York 10003.ORCID 0000-0001-6492-8906
Mark J AlkemaDepartment of Neurobiology, University of Massachusetts Medical School, Worcester, Massachusetts 01605.
Christian BraendleCentre National de la Recherche Scientifique, Institut National de la Santé et de la Recherche Médicale, Institut de Biologie Valrose, Université Nice Sophia Antipolis, 06100 Nice, France.
Jan E KammengaLaboratory of Nematology, Wageningen University, 6708 PB, Netherlands.
John WangBiodiversity Research Center, Academia Sinica, Taipei 115, Taiwan.
Leonid KruglyakDepartments of Human Genetics and Biological Chemistry, University of California, Los Angeles, California 90095 Howard Hughes Medical Institute, Chevy Chase, Maryland 20815.
Marie-Anne FélixInstitut de Biologie de l'École Normale Supérieure, Centre National de la Recherche Scientifique, Institut National de la Santé et de la Recherche Médicale, 75005 Paris, France.
Junho LeeDepartment of Biological Sciences, Institute of Molecular Biology and Genetics, Seoul National University, 08826, Korea Department of Biophysics and Chemical Biology, Seoul National University, 08826, Korea.
Erik C AndersenDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois 60208 Robert H. Lurie Comprehensive Cancer Center, Northwestern University, Chicago, Illinois 60611 Chemistry of Life Processes Institute, Northwestern University, Evanston, Illinois 60208 Northwestern Institute on Complex Systems, Northwestern University, Evanston, Illinois 60208 erik.andersen@northwestern.edu.ORCID 0000-0003-0229-9651

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
CELLULAR &MOLECULAR BASIS OF DISEASE TRAINING PROGRAMT32GM008061 · NIGMS · NORTHWESTERN UNIVERSITY · PI CARTHEW, RICHARD W. · 1985 to 2022
$17.1M
Molecular and neuronal mechanisms of complex behaviorsR01GM084491 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ALKEMA, MARK · 2008 to 2017
$3.0M
Genetic dissection of transcriptional and organismal phenotypes in C. elegansR01HG004321 · NHGRI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KRUGLYAK, LEONID · 2007 to 2014
$1.9M
Discovery and Characterization of Quantitative Trait NucleotidesR01GM089972 · NIGMS · NEW YORK UNIVERSITY · PI ROCKMAN, MATTHEW · 2009 to 2013
$1.5M
Determination of the distribution of fitness effects of mutations in C. elegansR01GM107227 · NIGMS · UNIVERSITY OF FLORIDA · PI BAER, CHARLES F · 2014 to 2017
$1.1M
NCI NIH HHS P30 CA060553NHGRI NIH HHS R01 HG004321NIGMS NIH HHS R01 GM084491NIGMS NIH HHS R01 GM089972NIGMS NIH HHS R01 GM107227NIGMS NIH HHS T32 GM008061
6 · The paper itself

Abstract

Telomeres are involved in the maintenance of chromosomes and the prevention of genome instability. Despite this central importance, significant variation in telomere length has been observed in a variety of organisms. The genetic determinants of telomere-length variation and their effects on organismal fitness are largely unexplored. Here, we describe natural variation in telomere length across the Caenorhabditis elegans species. We identify a large-effect variant that contributes to differences in telomere length. The variant alters the conserved oligonucleotide/oligosaccharide-binding fold of protection of telomeres 2 (POT-2), a homolog of a human telomere-capping shelterin complex subunit. Mutations within this domain likely reduce the ability of POT-2 to bind telomeric DNA, thereby increasing telomere length. We find that telomere-length variation does not correlate with offspring production or longevity in C. elegans wild isolates, suggesting that naturally long telomeres play a limited role in modifying fitness phenotypes in C. elegans.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsDNAGenetic VariationGenome-Wide Association StudyLongevityMutationSequence Analysis, DNATelomereTelomere-Binding ProteinsCaenorhabditis elegans ProteinsDNATelomere-Binding ProteinsCaenorhabditis elegansQTLshelterintelomere lengthwhole-genome sequence

Identifiers

PMID27449056
PMCPMC5012401

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.