Evidence map›Paper›PMID 27448242›Full record

ArticlePloS one2016

Development of a TaqMan Probe-Based Insulated Isothermal Polymerase Chain Reaction (iiPCR) Assay for Detection of Fusarium oxysporum f. sp. cubense Race 4.

Ying-Hong Lin, Yi-Jia Lin, Tsai-De Chang, Li-Ling Hong, Tzu-Yu Chen, Pi-Fang Linda Chang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Rapid Detection ofInternational journal of molecular sciences · 2022
    Article
  5. Use of LAMP for AssessingPlants (Basel, Switzerland) · 2020
    Article
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ying-Hong LinDepartment of Plant Medicine, National Pingtung University of Science and Technology, Pingtung, Taiwan.ORCID http://orcid.org/0000-0002-7055-0652
Yi-Jia LinDepartment of Plant Medicine, National Pingtung University of Science and Technology, Pingtung, Taiwan.
Tsai-De ChangDepartment of Plant Medicine, National Pingtung University of Science and Technology, Pingtung, Taiwan.
Li-Ling HongDepartment of Plant Medicine, National Pingtung University of Science and Technology, Pingtung, Taiwan.
Tzu-Yu ChenDepartment of Plant Medicine, National Pingtung University of Science and Technology, Pingtung, Taiwan.
Pi-Fang Linda ChangDepartment of Plant Pathology, National Chung Hsing University, Taichung, Taiwan.
National Pingtung University of Science and Technology · TWNational Chung Hsing University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study developed a novel and inexpensive detection method based on a TaqMan probe-based insulated isothermal polymerase chain reaction (iiPCR) method for the rapid detection of Panama disease caused by Fusarium oxysporum f. sp. cubense (Foc) race 4, which is currently among the most serious fungal vascular diseases worldwide. By using the portable POCKIT™ device with the novel primer set iiFoc-1/iiFoc-2, the Foc race 4 iiPCR assay (including DNA amplification and signal monitoring) could be completed within one hour. The developed Foc race 4 iiPCR assay is thus a user-friendly and efficient platform designed specifically for the detection of Foc race 4. The detection limit of this optimized Foc iiPCR system was estimated to be 1 copy of the target standard DNA as well as 1 fg of the Foc genomic DNA. This approach can serve as a rapid detection method for in planta detection of Foc race 4 in field-infected banana. It was concluded that this molecular detection procedure based on iiPCR has good potential for use as an efficient detection method.

Indexed as

Real-Time Polymerase Chain ReactionFusariumMusaPlant DiseasesSensitivity and Specificity

Identifiers

PMID27448242
PMCPMC4957775
OpenAlexW2492444061

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.