Evidence map›Paper›PMID 27448044›Full record

ArticleJournal of medical virology2017

Prevailing genotype distribution and characteristics of human respiratory syncytial virus in northeastern China.

Yuxuan Zheng, Li Liu, Shaohua Wang, Zhaolong Li, Min Hou, Jingliang Li, Xiao-Fang Yu, Wenyan Zhang, Shucheng Hua

Open access · hybridAbstract read
In one paragraph

Article in Journal of medical virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Recent sequence variation in probe binding site affected detection of respiratory syncytial virus group B by real-time RT-PCR.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Yuxuan ZhengDepartment of Respiratory Medicine, First Hospital of Jilin University, Changchun, Jilin Province, China.
Li LiuDepartment of Pediatric Respiratory Medicine, First Hospital of Jilin University, Changchun, Jilin Province, China.
Shaohua WangInstitute of Virology and AIDS Research, First Hospital of Jilin University, Changchun, Jilin Province, China.
Zhaolong LiInstitute of Virology and AIDS Research, First Hospital of Jilin University, Changchun, Jilin Province, China.
Min HouInstitute of Virology and AIDS Research, First Hospital of Jilin University, Changchun, Jilin Province, China.
Jingliang LiInstitute of Virology and AIDS Research, First Hospital of Jilin University, Changchun, Jilin Province, China.
Xiao-Fang YuInstitute of Virology and AIDS Research, First Hospital of Jilin University, Changchun, Jilin Province, China.
Wenyan ZhangInstitute of Virology and AIDS Research, First Hospital of Jilin University, Changchun, Jilin Province, China.
Shucheng HuaDepartment of Respiratory Medicine, First Hospital of Jilin University, Changchun, Jilin Province, China.
Jilin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although human respiratory syncytial virus (RSV) is one of the most common viruses inducing respiratory tract infections in young children and the elderly, the genotype distribution and characteristics of RSV in northeastern China have not been investigated. Here, we identified 25 RSV-A and 8 RSV-B strains from 80 samples of patients with respiratory infections between February 2015 and May 2015. All 25 RSV-A viruses were classified as the ON1 genotype, which rapidly spread and became the dominant genotype in the world since being identified in Ontario (Canada) in December 2010. All eight RSV-B viruses belonged to the BA genotype with a 60-nucleotide duplication, seven of which formed two new genotypes, BA-CCA and BA-CCB. The remaining RSV-B virus clustered with one of the Hangzhou strains belonging to genotype BA11. Construction of a phylogenetic tree and amino acid substitution analysis showed that Changchun ON1 viruses exclusively constituted Lineages 3, 5 and 6, and contained several unique and newly identified amino acid substitutions, including E224G, R244K, L289I, Y297H, and L298P. Selective pressure was also evaluated, and various N and O-glycosylation sites were predicted. This study provides the first genetic analysis of RSV in northeastern China and may facilitate a better understanding of the evolution of this virus locally and globally. J. Med. Virol. 89:222-233, 2017. © 2016 The Authors. Journal of Medical Virology Published by Wiley Periodicals, Inc.

Indexed as

GenotypeAmino Acid SubstitutionChild, PreschoolChinaCluster AnalysisFemaleHumansInfantInfant, NewbornMalePhylogenyPrevalenceRespiratory Syncytial Virus, HumanRespiratory Syncytial Virus InfectionsRNA, ViralSelection, GeneticRNA, Viralgenetic variabilityglycoproteinsmutation/mutation raterespiratory syncytial virus

Identifiers

PMID27448044
PMCPMC5157725
OpenAlexW2494552277

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.