Evidence map›Paper›PMID 27447938›Full record

ArticlePLoS neglected tropical diseases2016

Biliary Microbiota, Gallstone Disease and Infection with Opisthorchis felineus.

Irina V Saltykova, Vjacheslav A Petrov, Maria D Logacheva, Polina G Ivanova, Nikolay V Merzlikin, Alexey E Sazonov, Ludmila M Ogorodova, Paul J Brindley

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. The Microbiome and Metabolic Dysfunction-Associated Steatotic Liver Disease.International journal of molecular sciences · 2025
    Review
  5. Review
  6. Distinct gut microbiome features characterizeFrontiers in cellular and infection microbiology · 2025
    Article
  7. InvasiveInternational journal for parasitology. Parasites and wildlife · 2024
    Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Profiles of biliary microbiota in biliary obstruction patients withFrontiers in cellular and infection microbiology · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Irina V SaltykovaCentral Research Laboratory, Siberian State Medical University, Tomsk, Russian Federation.
Vjacheslav A PetrovCentral Research Laboratory, Siberian State Medical University, Tomsk, Russian Federation.
Maria D LogachevaLomonosov Moscow State University, Faculty of Bioengineering and Bioinformatics, Moscow, Russian Federation.
Polina G IvanovaCentral Research Laboratory, Siberian State Medical University, Tomsk, Russian Federation.
Nikolay V MerzlikinSurgical diseases department of Pediatric faculty, Siberian State Medical University, Tomsk, Russian Federation.
Alexey E SazonovCentral Research Laboratory, Siberian State Medical University, Tomsk, Russian Federation.
Ludmila M OgorodovaDepartment of Faculty Pediatrics, Siberian State Medical University, Tomsk, Russian Federation.
Paul J BrindleyResearch Center for Neglected Diseases of Poverty, Department of Microbiology, Immunology and Tropical Medicine, School of Medicine & Health Sciences, George Washington University, Washington, D.C., United States of America.
Siberian State Medical University · RUGeorge Washington University · USLomonosov Moscow State University · RU

Funding

Targeting parasite-host communication to combat liver fluke-induced bile duct cancerR01CA164719 · NCI · GEORGE WASHINGTON UNIVERSITY · PI Paul J Brindley, THEWARACH LAHA · 2012 to 2026
$5.0M
Biomarkers of Opisthorchis viverrini-induced cholangiocarcinomaR01CA155297 · NCI · GEORGE WASHINGTON UNIVERSITY · PI BETHONY, JEFFREY MICHAEL, BRINDLEY, PAUL J · 2011 to 2015
$2.7M
Pathogenesis of Opisthorchiasis induced persistent periductal fibrosis and CCAP50AI098639 · NIAID · KHON KAEN UNIVERSITY · PI SRIPA, BANCHOB · 2012 to 2016
$1.6M
NCI NIH HHS R01 CA155297NCI NIH HHS R01 CA164719NIAID NIH HHS P50 AI098639
6 · The paper itself

Abstract

backgroundThere is increasing interest in the microbiome of the hepatobiliary system. This study investigated the influence of infection with the fish-borne liver fluke, Opisthorchis felineus on the biliary microbiome of residents of the Tomsk region of western Siberia. METHODOLOGY/PRINCIPAL

findingsSamples of bile were provided by 56 study participants, half of who were infected with O. felineus, and all of who were diagnosed with gallstone disease. The microbiota of the bile was investigated using high throughput, Illumina-based sequencing targeting the prokaryotic 16S rRNA gene. About 2,797, discrete phylotypes of prokaryotes were detected. At the level of phylum, bile from participants with opisthorchiasis showed greater numbers of Synergistetes, Spirochaetes, Planctomycetes, TM7 and Verrucomicrobia. Numbers of > 20 phylotypes differed in bile of the O. felineus-infected compared to non-infected participants, including presence of species of the genera Mycoplana, Cellulosimicrobium, Microlunatus and Phycicoccus, and the Archaeans genus, Halogeometricum, and increased numbers of Selenomonas, Bacteroides, Rothia, Leptotrichia, Lactobacillus, Treponema and Klebsiella. CONCLUSIONS/SIGNIFICANCE: Overall, infection with the liver fluke O. felineus modified the biliary microbiome, increasing abundance of bacterial and archaeal phylotypes.

Indexed as

Gastrointestinal MicrobiomeAdultAnimalsBacteriaFemaleGallstonesHumansMaleMiddle AgedOpisthorchiasisOpisthorchis

Identifiers

PMID27447938
PMCPMC4957795
OpenAlexW2485034513

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.