Evidence map›Paper›PMID 27446971›Full record

ArticleJournal of medical imaging (Bellingham, Wash.)2016

Task-based optimization of flip angle for fibrosis detection in T1-weighted MRI of liver.

Jonathan F Brand, Lars R Furenlid, Maria I Altbach, Jean-Philippe Galons, Achyut Bhattacharyya, Puneet Sharma, Tulshi Bhattacharyya, Ali Bilgin, Diego R Martin

Open access · hybridAbstract read
In one paragraph

Article in Journal of medical imaging (Bellingham, Wash.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 92% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Jonathan F BrandUniversity of Arizona , College of Optical Sciences, 1630 East University Boulevard, Tucson, Arizona 85719, United States.
Lars R FurenlidUniversity of Arizona, College of Optical Sciences, 1630 East University Boulevard, Tucson, Arizona 85719, United States; University of Arizona, College of Medicine, Department of Medical Imaging, P.O. Box 245067 Tucson, Arizona 85724-5067, United States.
Maria I AltbachUniversity of Arizona , College of Medicine, Department of Medical Imaging, P.O. Box 245067 Tucson, Arizona 85724-5067, United States.
Jean-Philippe GalonsUniversity of Arizona , College of Medicine, Department of Medical Imaging, P.O. Box 245067 Tucson, Arizona 85724-5067, United States.
Achyut BhattacharyyaUniversity of Arizona , College of Medicine, Department of Pathology, 1501 North Campbell Avenue, Tucson, Arizona 85724, United States.
Puneet SharmaUniversity of Arizona , College of Medicine, Department of Medical Imaging, P.O. Box 245067 Tucson, Arizona 85724-5067, United States.
Tulshi BhattacharyyaUniversity of Arizona , College of Medicine, Department of Pathology, 1501 North Campbell Avenue, Tucson, Arizona 85724, United States.
Ali BilginUniversity of Arizona , College of Medicine, Department of Medical Imaging, P.O. Box 245067 Tucson, Arizona 85724-5067, United States.
Diego R MartinUniversity of Arizona , College of Medicine, Department of Medical Imaging, P.O. Box 245067 Tucson, Arizona 85724-5067, United States.
University of Arizona · US

Funding

Graduate Training in Biomedical Imaging SpectrocopyT32EB000809 · NIBIB · UNIVERSITY OF ARIZONA · PI GMITRO, ARTHUR F. · 2003 to 2018
$3.3M
NIBIB NIH HHS T32 EB000809
6 · The paper itself

Abstract

Chronic liver disease is a worldwide health problem, and hepatic fibrosis (HF) is one of the hallmarks of the disease. The current reference standard for diagnosing HF is biopsy followed by pathologist examination; however, this is limited by sampling error and carries a risk of complications. Pathology diagnosis of HF is based on textural change in the liver as a lobular collagen network that develops within portal triads. The scale of collagen lobules is characteristically in the order of 1 to 5 mm, which approximates the resolution limit of in vivo gadolinium-enhanced magnetic resonance imaging in the delayed phase. We use MRI of formalin-fixed human ex vivo liver samples as phantoms that mimic the textural contrast of in vivo Gd-MRI. We have developed a local texture analysis that is applied to phantom images, and the results are used to train model observers to detect HF. The performance of the observer is assessed with the area-under-the-receiver-operator-characteristic curve (AUROC) as the figure-of-merit. To optimize the MRI pulse sequence, phantoms were scanned with multiple times at a range of flip angles. The flip angle that was associated with the highest AUROC was chosen as optimal for the task of detecting HF.

Indexed as

hepatic fibrosishotelling observerlivermagnetic resonance imagingMRIoptimizationtexture analysis

Identifiers

PMID27446971
PMCPMC4955011
OpenAlexW2480095778

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.